RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 JADE1Q6IE81 842 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC39A5Q6ZMH5 540 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 RIBC1Q8N443 379 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 TEX9Q8N6V9 391 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 ANKRD42Q8N9B4 389 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 NUP85Q9BW27 656 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 KCNK9Q9NPC2 374 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 TRIM33Q9UPN9 1127 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 KRT19P08727 400 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 FOXN2P32314 431 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 STX2P32856 288 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 ABL2P42684 1182 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 MBTPS1Q14703 1052 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 STAT4Q14765 748 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 TRIM60Q495X7 471 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 SGO2Q562F6 1265 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 AGGF1Q8N302 714 aaeCLIP13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 RNF169Q8NCN4 708 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 FBXL13Q8NEE6 735 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 KAT5Q92993 513 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 LPPQ93052 612 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 SPDL1Q96EA4 605 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 CGRRF1Q99675 332 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 RPL26L1Q9UNX3 145 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 NAALADL1Q9UQQ1 740 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 ATP11BQ9Y2G3 1177 aa13.3□□□□□ -0.28
RTFDC1-202ENST00000357348 MROH7Q68CQ1 1323 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 MGEA5O60502 916 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ABHD2P08910 425 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 GJA8P48165 433 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ITGA8P53708 1063 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 KYNUQ16719 465 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 PPM1KQ8N3J5 372 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 CFAP61Q8NHU2 1237 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 GRK7Q8WTQ7 553 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 SHC3Q92529 594 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 MAML1Q92585 1016 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 SCLYQ96I15 445 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 DCLK3Q9C098 648 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 STK38LQ9Y2H1 464 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 IPPQ9Y573 584 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 GPR182O15218 404 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 RECQL4O94761 1208 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 VNN1O95497 513 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ASMTLO95671 621 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 AXLP30530 894 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 CCL23P55773 120 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 WDR4P57081 412 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 DCAF4L1Q3SXM0 396 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ZACNQ401N2 412 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 GDAP1Q8TB36 358 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 DENND1AQ8TEH3 1009 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ZNF483Q8TF39 744 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 MCOLN1Q9GZU1 580 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 ETNK1Q9HBU6 452 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 NKIRAS1Q9NYS0 192 aa13.29□□□□□ -0.28
RTFDC1-202ENST00000357348 TRAFD1O14545 582 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 PEX11AO75192 247 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 SKAP2O75563 359 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CALB2P22676 271 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CALRP27797 417 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 GRM5P41594 1212 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CLDN10P78369 228 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 IL9RQ01113 521 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CENPCQ03188 943 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 TLE2Q04725 743 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 WDR49Q8IV35 697 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 BBOF1Q8ND07 529 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms