RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 YAF2Q8IY57 180 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 SEMA6AQ9H2E6 1030 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 ZNF222Q9UK12 451 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 MTRF1O75570 445 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 SOAT2O75908 522 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 UCHL3P15374 230 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 PBLDP30039 288 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 KRT35Q92764 455 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 DOLKQ9UPQ8 538 aa11.41□□□□□ -0.58
GTF3C1-201ENST00000356183 ADGRL3Q9HAR2 1447 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 SPAG6O75602 509 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 RAG1P15918 1043 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 DGUOKQ16854 277 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 NACC2Q96BF6 587 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MMP19Q99542 508 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MROH7-TTC4A0A0A0MT08 1334 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 HAUS6Q7Z4H7 955 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 COMMD2Q86X83 199 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 PTPRHQ9HD43 1115 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 IARS2Q9NSE4 1012 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MRGBPQ9NV56 204 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 C15orf41Q9Y2V0 281 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 HEATR9A2RTY3 570 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 CST8O60676 142 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 ATG7O95352 703 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MED26O95402 600 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 LCA5LO95447 670 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 KRT6AP02538 564 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 CYBBP04839 570 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 SFNP31947 248 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 NCKAP1LP55160 1127 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 YWHAZP63104 245 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 OTUD3Q5T2D3 398 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 PAPD7Q5XG87 772 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 EFL1Q7Z2Z2 1120 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 DEFB107AQ8IZN7 70 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 COMMD8Q9NX08 183 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 TRMT6Q9UJA5 497 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 POLR1AO95602 1720 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 A0A1W2PQJ5 194 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 GLRA3O75311 464 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 GPD1P21695 349 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 WDR72Q3MJ13 1102 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 AGAP9Q5VTM2 703 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 PPP1R10Q96QC0 940 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 PI4K2AQ9BTU6 479 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 UBXN6Q9BZV1 441 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 RXFP1Q9HBX9 757 aa11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-201ENST00000356183 MAP2K7O14733 419 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 TBC1D12O60347 775 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 PRKCBP05771 671 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 PEX5P50542 639 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 AP3M2P53677 418 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 ACAP1Q15027 740 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 EPC2Q52LR7 807 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 TNIP3Q96KP6 325 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 MED15Q96RN5 788 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 MTA3Q9BTC8 594 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 FBXO40Q9UH90 709 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 PADI4Q9UM07 663 aa11.4□□□□□ -0.59
GTF3C1-201ENST00000356183 TPD52L2O43399 206 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 RPS6KA5O75582 802 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 TGM2P21980 687 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 IREB2P48200 963 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 LRRC74BQ6ZQY2 392 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 RIPOR1Q6ZS17 1223 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 STX12Q86Y82 276 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ZSCAN18Q8TBC5 510 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ABT1Q9ULW3 272 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 TULP2O00295 520 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 HS6ST1O60243 411 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ABCB1P08183 1280 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 BAG6P46379 1132 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PRKCQQ04759 706 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 STX4Q12846 297 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 NCOA4Q13772 614 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PPP1R18Q6NYC8 613 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 MACC1Q6ZN28 852 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 CYP4Z2PQ8N1L4 340 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 DGCR6LQ9BY27 220 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PTGES3LE9PB15 166 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 LBPP18428 481 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms