RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MSTO1Q9BUK6 570 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 PIH1D1Q9NWS0 290 aaKnown RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 NDE1Q9NXR1 346 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 SERPINA10Q9UK55 444 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 DRG1Q9Y295 367 aaKnown RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 NR2E3Q9Y5X4 410 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 LRCH4O75427 683 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 OR6B1O95007 311 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ICAM1P05362 532 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CHRNA5P30532 468 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CCNFP41002 786 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 VPS72Q15906 364 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 CDO1Q16878 200 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MTHFD1LQ6UB35 978 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF398Q8TD17 642 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 GORASP1Q9BQQ3 440 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 TCHPQ9BT92 498 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 DHRS4Q9BTZ2 278 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 MTMR12Q9C0I1 747 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 ASCC2Q9H1I8 757 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-203ENST00000356147 TBC1D22BQ9NU19 505 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 USP21Q9UK80 565 aa10.58□□□□□ -0.72
PTPRA-203ENST00000356147 hCG_2014768A0A024R1R8 64 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 LOC100653049A0A140TA62 436 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 IQANK1A0A1B0GTG1 560 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 I3L4J1 428 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 TOM1L1O75674 476 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 GRAP2O75791 330 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 KRT34O76011 436 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 F7P08709 466 aaPredicted RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 NPR1P16066 1061 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 PDE1BQ01064 536 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 CIAPIN1Q6FI81 312 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 DENND1BQ6P3S1 775 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 POLNQ7Z5Q5 900 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 KCTD6Q8NC69 237 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 B4GALNT2Q8NHY0 566 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 SLC26A7Q8TE54 656 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ECSITQ9BQ95 431 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 STRIP2Q9ULQ0 834 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 RIPK3Q9Y572 518 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ANKRD33BA6NCL7 494 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 C3orf70A6NLC5 250 aaPredicted RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ABLIM1O14639 778 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 CIB2O75838 187 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 DSG1Q02413 1049 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 TRAF1Q13077 416 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 DPYSL3Q14195 570 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 PSMD6Q15008 389 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ZRSR2Q15696 482 aaKnown RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 CMPK2Q5EBM0 449 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 TRMT10BQ6PF06 316 aaKnown RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 DENND5BQ6ZUT9 1274 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 UNC5BQ8IZJ1 945 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
PTPRA-203ENST00000356147 FAF2Q96CS3 445 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 SMYD2Q9NRG4 433 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF212Q9UDV6 495 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 CYTH4Q9UIA0 394 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 HEY1Q9Y5J3 304 aa10.57□□□□□ -0.72
PTPRA-203ENST00000356147 SPECC1L-ADORA2AF8WAN1 911 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 STAM2O75886 525 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 PGM3O95394 542 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 DHRS4L1P0CG22 281 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CDH8P55286 799 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 MRPS5P82675 430 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 PRKCEQ02156 737 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 USP4Q13107 963 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CUL3Q13618 768 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 BAATQ14032 418 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SFT2D3Q587I9 215 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 DRICH1Q6PGQ1 229 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 NUDCD3Q8IVD9 361 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SAMD3Q8N6K7 520 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 E2F7Q96AV8 911 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 NMD3Q96D46 503 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 GPATCH2LQ9NWQ4 482 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TMOD2Q9NZR1 351 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 ANGPTL2Q9UKU9 493 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 PCDHA10Q9Y5I2 948 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 MAD1L1Q9Y6D9 718 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 A0A0B4J269 797 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 H7C0C1 242 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 HNRNPCL1O60812 293 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms