RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 KIRREL3Q8IZU9 778 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 KCNV2Q8TDN2 545 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 PTPRN2Q92932 1015 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 FZD1Q9UP38 647 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 AFG3L2Q9Y4W6 797 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 IGKV6-21A0A0C4DH24 114 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 A0A0G2JND7 137 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 ACKR2O00590 384 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 CHADO15335 359 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 CCDC22O60826 627 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 DNAJC6O75061 913 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 CBLBQ13191 982 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 KBTBD12Q3ZCT8 623 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 FAM47CQ5HY64 1035 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 APOBEC3FQ8IUX4 373 aaKnown RBP19.04■□□□□ 0.64
SPNS3-201ENST00000355530 IGDCC3Q8IVU1 814 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 DHX37Q8IY37 1157 aaKnown RBP19.04■□□□□ 0.64
SPNS3-201ENST00000355530 LRRC71Q8N4P6 559 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 SLC4A11Q8NBS3 891 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 CFAP61Q8NHU2 1237 aa19.04■□□□□ 0.64
SPNS3-201ENST00000355530 MTO1Q9Y2Z2 717 aaKnown RBP19.04■□□□□ 0.64
SPNS3-201ENST00000355530 ZNF143P52747 638 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 HIRAP54198 1017 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 OSTNP61366 133 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 TFDP2Q14188 446 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 TAF5Q15542 800 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 DARS2Q6PI48 645 aaKnown RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 KLRG1Q96E93 195 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 NAF1Q96HR8 494 aaKnown RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 ADPGKQ9BRR6 497 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 FRMD8Q9BZ67 464 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 SDCBP2Q9H190 292 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 C12orf65Q9H3J6 166 aaKnown RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 DENND2DQ9H6A0 471 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 PNPLA8Q9NP80 782 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 SIX4Q9UIU6 781 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 LRRC42Q9Y546 428 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 NUMBLQ9Y6R0 609 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 M0QYV0 167 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 MICAL2O94851 1124 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 ENDOD1O94919 500 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 ARFIP2P53365 341 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 YWHAGP61981 247 aaKnown RBP eCLIP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 PRKD1Q15139 912 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 TMEM132AQ24JP5 1023 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 CMPK2Q5EBM0 449 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 FAM102AQ5T9C2 384 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 SKA1Q96BD8 255 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 SERAC1Q96JX3 654 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 PEBP4Q96S96 227 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 TRIM6Q9C030 488 aaPredicted RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 FZD8Q9H461 694 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 RPF1Q9H9Y2 349 aaKnown RBP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.03■□□□□ 0.64
SPNS3-201ENST00000355530 HEY2Q9UBP5 337 aa19.03■□□□□ 0.64
SPNS3-201ENST00000355530 ZBTB42B2RXF5 422 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CILPO75339 1184 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CXCL8P10145 99 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CDH8P55286 799 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CDK16Q00536 496 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 NOL9Q5SY16 702 aaKnown RBP19.02■□□□□ 0.64
SPNS3-201ENST00000355530 PRAMEF18Q5VWM3 479 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 SH2D5Q6ZV89 423 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 LRRC6Q86X45 466 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CEP120Q8N960 986 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 PTCD3Q96EY7 689 aaKnown RBP19.02■□□□□ 0.64
SPNS3-201ENST00000355530 FAM111AQ96PZ2 611 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 MIPEPQ99797 713 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 CNPY3Q9BT09 278 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 SMYD3Q9H7B4 428 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 DCLRE1BQ9H816 532 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 HMGXB4Q9UGU5 601 aa19.02■□□□□ 0.64
SPNS3-201ENST00000355530 SOWAHBA6NEL2 793 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 INO80B-WBP1J3KQ70 363 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 KLF11O14901 512 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 HMGCRP04035 888 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 GPD1P21695 349 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 CDH6P55285 790 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 FAAP100Q0VG06 881 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 ORC1Q13415 861 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 BLMHQ13867 455 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 EEF1DP3Q658K8 133 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 LBX2Q6XYB7 198 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 ZC3H18Q86VM9 953 aaKnown RBP19.01■□□□□ 0.63
SPNS3-201ENST00000355530 RIOX2Q8IUF8 465 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 C1orf127Q8N9H9 656 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 TMEM176AQ96HP8 235 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 TWNKQ96RR1 684 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 BTBD10Q9BSF8 475 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 TMEM120AQ9BXJ8 343 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 INO80BQ9C086 356 aaPredicted RBP19.01■□□□□ 0.63
SPNS3-201ENST00000355530 ELOVL4Q9GZR5 314 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 CDT1Q9H211 546 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 ALG13Q9NP73 1137 aaKnown RBP19.01■□□□□ 0.63
SPNS3-201ENST00000355530 PAK5Q9P286 719 aa19.01■□□□□ 0.63
SPNS3-201ENST00000355530 B4GALT5O43286 388 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms