RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RABGAP1LQ5R372 815 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 C1orf186Q6ZWK4 172 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 EXD1Q8NHP7 514 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 MTBPQ96DY7 904 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PAFAH2Q99487 392 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SPON2Q9BUD6 331 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 EMILIN2Q9BXX0 1053 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 NIF3L1Q9GZT8 377 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 MYLK2Q9H1R3 596 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SP110Q9HB58 689 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 FAM198AQ9UFP1 575 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 GRIK4Q16099 956 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 TFDP3Q5H9I0 405 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ANO5Q75V66 913 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ARHGAP18Q8N392 663 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 CCNYL1Q8N7R7 359 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 CEP70Q8NHQ1 597 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 AGO4Q9HCK5 861 aaKnown RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ARFGEF2Q9Y6D5 1785 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 LCP1P13796 627 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 GRK4P32298 578 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 ESRRGP62508 458 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 MORF4L2Q15014 288 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 PRELID2Q8N945 189 aa12.82□□□□□ -0.36
COLCA1-201ENST00000355430 SUDS3Q9H7L9 328 aaPredicted RBP12.82□□□□□ -0.36
COLCA1-201ENST00000355430 TBKBP1A7MCY6 615 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 MEIS2O14770 477 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 MARSP56192 900 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 UBA3Q8TBC4 463 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 EXT2Q93063 718 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 NAF1Q96HR8 494 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 IKZF4Q9H2S9 585 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ALDH2P05091 517 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ORC1Q13415 861 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PTK6Q13882 451 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 RRP1BQ14684 758 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PGM5Q15124 567 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 KIZQ2M2Z5 673 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 MROH9Q5TGP6 573 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ASIC4Q96FT7 647 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 RSAD1Q9HA92 442 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ERVK-5Q9HDB9 667 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ZFATQ9P243 1243 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PAK5Q9P286 719 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PCYOX1Q9UHG3 505 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 SNX3O60493 162 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PAX7P23759 505 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 CLCN3P51790 818 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 NME3Q13232 169 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 TDRD10Q5VZ19 366 aaKnown RBP12.81□□□□□ -0.36
COLCA1-201ENST00000355430 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 TMEM120AQ9BXJ8 343 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 SETD4Q9NVD3 440 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ADA2Q9NZK5 511 aa12.81□□□□□ -0.36
COLCA1-201ENST00000355430 ATXN2Q99700 1313 aaKnown RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 CYP3A7-CYP3A51PA0A087WV96 503 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 CYP3A7P24462 503 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 PMLP29590 882 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 PDCD6IPQ8WUM4 868 aaKnown RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 MRPS31Q92665 395 aaKnown RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 DSEQ9UL01 958 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 SPAG6O75602 509 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 NUDT17P0C025 328 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 MYL2P10916 166 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 CDC25CP30307 473 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 KCNJ2P63252 427 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 FOXR2Q6PJQ5 311 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 DEFB118Q96PH6 123 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 ZFXP17010 805 aaPredicted RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 CHKAP35790 457 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 RARRES1P49788 294 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
COLCA1-201ENST00000355430 GJB6O95452 261 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 NAMPTP43490 491 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms