RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SF3B1O75533 1304 aaKnown RBP eCLIP21.56■■□□□ 1.04
TRIM4-202ENST00000354241 RNF8O76064 485 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 OAZ2O95190 189 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 OR4Q2P0C623 313 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 LLGL1Q15334 1064 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 ATP13A4Q4VNC1 1196 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 C8orf74Q6P047 294 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 FUT10Q6P4F1 479 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 SLC26A9Q7LBE3 791 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 TMCO2Q7Z6W1 182 aaPredicted RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 SIX6OS1Q8N1H7 587 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 ARFGAP1Q8N6T3 406 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 ZMIZ2Q8NF64 920 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 CFAP57Q96MR6 1250 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 CNPY3Q9BT09 278 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 LRRC1Q9BTT6 524 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 KRT1P04264 644 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 SCNN1AP37088 669 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 DEFB103AP81534 67 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 ACAP1Q15027 740 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 HADHQ16836 314 aaKnown RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 CDO1Q16878 200 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 C15orf59Q2T9L4 293 aaPredicted RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 LRRC38Q5VT99 294 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 SLC13A5Q86YT5 568 aaPredicted RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 SPATA2LQ8IUW3 424 aaPredicted RBP21.55■■□□□ 1.04
TRIM4-202ENST00000354241 TOP1MTQ969P6 601 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 B3GALT6Q96L58 329 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 ZWILCHQ9H900 591 aa21.55■■□□□ 1.04
TRIM4-202ENST00000354241 CCDC188H7C350 402 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 ZRANB2O95218 330 aaKnown RBP eCLIP21.54■■□□□ 1.04
TRIM4-202ENST00000354241 NDUFV1P49821 464 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 TKTL1P51854 596 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 SMC1AQ14683 1233 aaKnown RBP21.54■■□□□ 1.04
TRIM4-202ENST00000354241 CCDC14Q49A88 953 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 SLC39A12Q504Y0 691 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 TXNRD3NBQ6F5E7 133 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 C4orf50Q6ZRC1 276 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 TMEM173Q86WV6 379 aaPredicted RBP21.54■■□□□ 1.04
TRIM4-202ENST00000354241 EXD1Q8NHP7 514 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 NDRG1Q92597 394 aaKnown RBP21.54■■□□□ 1.04
TRIM4-202ENST00000354241 PNKPQ96T60 521 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 ZCWPW1Q9H0M4 648 aa21.54■■□□□ 1.04
TRIM4-202ENST00000354241 COL4A6Q14031 1691 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 GOLGA6L10A0A0M3HER8 536 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DPYSL4O14531 572 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 SDC4P31431 198 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ALDH7A1P49419 539 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 WDR5P61964 334 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ATP11AP98196 1134 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 SLC25A11Q02978 314 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ADCY1Q08828 1119 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 CTXN3Q4LDR2 81 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ODF2Q5BJF6 829 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 EFHC1Q5JVL4 640 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 SH3PXD2AQ5TCZ1 1133 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 GPRIN1Q7Z2K8 1008 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DCP1BQ8IZD4 617 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 RNF25Q96BH1 459 aaPredicted RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ACSF2Q96CM8 615 aaPredicted RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 CSNK1G1Q9HCP0 422 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 PCSK1NQ9UHG2 260 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 NR2E1Q9Y466 385 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ALPK3Q96L96 1907 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 PI4K2BG5E9Z4 385 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 EFCAB14O75071 495 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DESP17661 470 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 FGFR3P22607 806 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 MIPP30301 263 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 MRPS5P82675 430 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ELAVL2Q12926 359 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 SPOUT1Q5T280 376 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 ZNF280DQ6N043 979 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 BCL7CQ8WUZ0 217 aaPredicted RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 FAM149B1Q96BN6 582 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 RBM41Q96IZ5 413 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DDX47Q9H0S4 455 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 CWH43Q9H720 699 aa21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DMAP1Q9NPF5 467 aaPredicted RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 DDX56Q9NY93 547 aaKnown RBP21.53■■□□□ 1.04
TRIM4-202ENST00000354241 TCRBV7S2A1N4TA0A589 114 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 HHLA1C9JL84 531 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 IL1R2P27930 398 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 SMTNL2Q2TAL5 461 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 POLNQ7Z5Q5 900 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 ULBP1Q9BZM6 244 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 UBXN6Q9BZV1 441 aa21.52■■□□□ 1.04
TRIM4-202ENST00000354241 NGRNQ9NPE2 291 aaKnown RBP21.52■■□□□ 1.04
TRIM4-202ENST00000354241 KRT7P08729 469 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 CETN2P41208 172 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 SLC7A5Q01650 507 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 RAB6CQ53S08 254 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 RAB41Q5JT25 222 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 FBXO38Q6PIJ6 1188 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 UBE2Q1Q7Z7E8 422 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 RCOR2Q8IZ40 523 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 FAM172AQ8WUF8 416 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 RAB6CQ9H0N0 254 aa21.51■■□□□ 1.03
TRIM4-202ENST00000354241 IL23AQ9NPF7 189 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms