RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 MAPK13O15264 365 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 MSCO60682 206 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 AOC2O75106 756 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 SLC29A2Q14542 456 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 PDCD7Q8N8D1 485 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 ACTL9Q8TC94 416 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 FGD4Q96M96 766 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 C10orf88Q9H8K7 445 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 FAM208AQ9UK61 1670 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 CFAP69A5D8W1 941 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 EPHB3P54753 998 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 USP10Q14694 798 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 KCNA10Q16322 511 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 DBN1Q16643 649 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 SLC35G1Q2M3R5 365 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 WDR59Q6PJI9 974 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 SPOCD1Q6ZMY3 1216 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 NUDT18Q6ZVK8 323 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 SH3KBP1Q96B97 665 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 DMGDHQ9UI17 866 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 SLC30A1Q9Y6M5 507 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 LRP6O75581 1613 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 F8VP50 259 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 CBX4O00257 560 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 ESRRAP11474 423 aaPredicted RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 YWHAZP63104 245 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 MAPK7Q13164 816 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 EPS8L1Q8TE68 723 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 LATS2Q9NRM7 1088 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 MARCOQ9UEW3 520 aaPredicted RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 TRIM68Q6AZZ1 485 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
SMC6-201ENST00000351948 ULBP1Q9BZM6 244 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 CIPCQ9C0C6 399 aa14.25□□□□□ -0.13
SMC6-201ENST00000351948 ZSCAN5CA6NGD5 496 aaPredicted RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 PPFIA2O75334 1257 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ASS1P00966 412 aaKnown RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 GFAPP14136 432 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 MROH9Q5TGP6 573 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 SYDE1Q6ZW31 735 aaPredicted RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 CASKIN2Q8WXE0 1202 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 KAT2BQ92831 832 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ELMO2Q96JJ3 720 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ZFP42Q96MM3 310 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ARHGEF38Q9NXL2 777 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 CPSF2Q9P2I0 782 aaKnown RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 CACNA1FO60840 1977 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 SLC2A3P11169 496 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■■□ 21.3
SMC6-201ENST00000351948 ELAVL2Q12926 359 aaKnown RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 STAT4Q14765 748 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 C15orf59Q2T9L4 293 aaPredicted RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 CACUL1Q86Y37 369 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 VPS28Q9UK41 221 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 BAG5Q9UL15 447 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 TLR2O60603 784 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 NDUFS3O75489 264 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 CABYRO75952 493 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ART3Q13508 389 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ARHGEF7Q14155 803 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 AADACL2Q6P093 401 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 GPR152Q8TDT2 470 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 RSRC1Q96IZ7 334 aaKnown RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 F9P00740 461 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 AMHP03971 560 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 CENPCQ03188 943 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
SMC6-201ENST00000351948 NR1H3Q13133 447 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ZSWIM2Q8NEG5 633 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 LRGUKQ96M69 825 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 TRPV6Q9H1D0 765 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 VCX3BQ9H321 246 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 ATXN3LQ9H3M9 355 aa14.24□□□□□ -0.13
SMC6-201ENST00000351948 F8W8V4 182 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 CAPN15O75808 1086 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 HMGCRP04035 888 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 PYGMP11217 842 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 BRCC3P46736 316 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 ZRANB3Q5FWF4 1079 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 DMAP1Q9NPF5 467 aaPredicted RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 FAM47DPA6NHR8 397 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 CLDN5O00501 218 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 ZNF263O14978 683 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 AMPD1P23109 780 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 NCKAP1LP55160 1127 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 SLC27A5Q9Y2P5 690 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 LRRC10BA6NIK2 292 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 CYP2F1P24903 491 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 PTK7Q13308 1070 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 TSNAXIP1Q2TAA8 658 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms