RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
SNCG-201ENST00000348795 PGRMC1O00264 195 aaKnown RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 DDX3YO15523 660 aaKnown RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 PAPSS1O43252 624 aaPredicted RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 SOD2P04179 222 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 PDGFRAP16234 1089 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 PTPN9P43378 593 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 PEX5P50542 639 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 COPS2P61201 443 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 MRPS5P82675 430 aaKnown RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 TMEM240Q5SV17 173 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 CC2D1AQ6P1N0 951 aaPredicted RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 BEND5Q7L4P6 421 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 DDX53Q86TM3 631 aaKnown RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 COLGALT1Q8NBJ5 622 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 UBXN4Q92575 508 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 RBM41Q96IZ5 413 aaKnown RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 C8orf48Q96LL4 319 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 RAD9AQ99638 391 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 SMOQ99835 787 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNCG-201ENST00000348795 HERC2P3Q9BVR0 1158 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNCG-201ENST00000348795 CHST7Q9NS84 486 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 EHD2Q9NZN4 543 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 CHORDC1Q9UHD1 332 aaPredicted RBP19.31■□□□□ 0.68
SNCG-201ENST00000348795 STAP1Q9ULZ2 295 aa19.31■□□□□ 0.68
SNCG-201ENST00000348795 COL4A6Q14031 1691 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 C2CD4BA6NLJ0 364 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 CCDC188H7C350 402 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 CLDN5O00501 218 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 CTIFO43310 598 aaKnown RBP19.3■□□□□ 0.68
SNCG-201ENST00000348795 CEP104O60308 925 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 TBC1D4O60343 1298 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 LCP1P13796 627 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 BDNFP23560 247 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 TKTL1P51854 596 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 YWHAZP63104 245 aaKnown RBP19.3■□□□□ 0.68
SNCG-201ENST00000348795 SLC39A12Q504Y0 691 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 PHLDB2Q86SQ0 1253 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 RCOR2Q8IZ40 523 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 EXD1Q8NHP7 514 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 LPIN3Q9BQK8 851 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 FBXO44Q9H4M3 255 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 MTRRQ9UBK8 725 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 PACSIN2Q9UNF0 486 aaPredicted RBP19.3■□□□□ 0.68
SNCG-201ENST00000348795 NR2E3Q9Y5X4 410 aa19.3■□□□□ 0.68
SNCG-201ENST00000348795 GOLGA6L10A0A0M3HER8 536 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 F8W810 466 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 TULP2O00295 520 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 SRGAP2O75044 1071 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 ZRANB2O95218 330 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNCG-201ENST00000348795 CPB1P15086 417 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 NOS2P35228 1153 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 GRIK1P39086 918 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 SSR1P43307 286 aaKnown RBP19.29■□□□□ 0.68
SNCG-201ENST00000348795 GLUD2P49448 558 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 RPL10AP62906 217 aaKnown RBP19.29■□□□□ 0.68
SNCG-201ENST00000348795 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 TPGS2Q68CL5 300 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 PM20D1Q6GTS8 502 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 SLC8B1Q6J4K2 584 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 LRRTM3Q86VH5 581 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 ARHGAP18Q8N392 663 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 COG1Q8WTW3 980 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 BTBD6Q96KE9 485 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 CAPZA3Q96KX2 299 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 TBCBQ99426 244 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 POPDC2Q9HBU9 364 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNCG-201ENST00000348795 MTUS1Q9ULD2 1270 aa19.29■□□□□ 0.68
SNCG-201ENST00000348795 NT5C1B-RDH14C9J2C7 533 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 DAB1O75553 588 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 ZBED1O96006 694 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 URODP06132 367 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 CXCR5P32302 372 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 MATKP42679 507 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 TUFMP49411 452 aaKnown RBP19.28■□□□□ 0.68
SNCG-201ENST00000348795 DSG1Q02413 1049 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 PSMD5Q16401 504 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 BOLA3Q53S33 107 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 STRADAQ7RTN6 431 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 JOSD2Q8TAC2 188 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 RXFP2Q8WXD0 754 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 CLP1Q92989 425 aaKnown RBP19.28■□□□□ 0.68
SNCG-201ENST00000348795 RNPC3Q96LT9 517 aaKnown RBP19.28■□□□□ 0.68
SNCG-201ENST00000348795 RUNDC3BQ96NL0 473 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 DDX23Q9BUQ8 820 aaKnown RBP19.28■□□□□ 0.68
SNCG-201ENST00000348795 HOMER3Q9NSC5 361 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 USTQ9Y2C2 406 aa19.28■□□□□ 0.68
SNCG-201ENST00000348795 MRPL42Q9Y6G3 142 aaKnown RBP19.28■□□□□ 0.68
SNCG-201ENST00000348795 ALPK3Q96L96 1907 aa19.27■□□□□ 0.68
SNCG-201ENST00000348795 RTN3O95197 1032 aaPredicted RBP19.27■□□□□ 0.68
SNCG-201ENST00000348795 AIF1P55008 147 aa19.27■□□□□ 0.68
SNCG-201ENST00000348795 DAOAP59103 153 aa19.27■□□□□ 0.68
SNCG-201ENST00000348795 RNASE9P60153 205 aaKnown RBP19.27■□□□□ 0.68
SNCG-201ENST00000348795 GLE1Q53GS7 698 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms