RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 CAPNS2Q96L46 248 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 MIOSQ9NXC5 875 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 CHRNA1P02708 482 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 NT5DC4Q86YG4 428 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 PABPC3Q9H361 631 aaKnown RBP17.99■□□□□ 0.47
SMARCC2-202ENST00000347471 RBP3P10745 1247 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 KDELR1P24390 212 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 BRCC3P46736 316 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 BCAR1P56945 870 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 EIF3EP60228 445 aaKnown RBP17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 SMAD1Q15797 465 aaKnown RBP17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 SENP8Q96LD8 212 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 DDX56Q9NY93 547 aaKnown RBP17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 CNTN3Q9P232 1028 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 PTGESO14684 152 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 CDKN2BP42772 138 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 IFNAR2P48551 515 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 NDUFV1P49821 464 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 TRNP1Q6NT89 227 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 SIX6OS1Q8N1H7 587 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 PEBP4Q96S96 227 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 RHOBTB2Q9BYZ6 727 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 POC1B-GALNT4F8VUJ3 575 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 LIASO43766 372 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 PECAM1P16284 738 aaPredicted RBP17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 AXLP30530 894 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 SEC24CP53992 1094 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 ADAM17P78536 824 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 PIGZQ86VD9 579 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 CNPY3Q9BT09 278 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 KCNK9Q9NPC2 374 aa17.98■□□□□ 0.47
SMARCC2-202ENST00000347471 MCF2LO15068 1137 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 TKTP29401 623 aaKnown RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 ACTN2P35609 894 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 INCA1Q0VD86 236 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 LRRC52Q8N7C0 313 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 RUNDC3BQ96NL0 473 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 TRPV6Q9H1D0 765 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 CTNNAL1Q9UBT7 734 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 PFKMP08237 780 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 CDH5P33151 784 aaPredicted RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 MAN1A1P33908 653 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 GDF10P55107 478 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 CYP1B1Q16678 543 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 DEFB115Q30KQ5 88 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 MREGQ8N565 214 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 B3GALNT2Q8NCR0 500 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 TNIP3Q96KP6 325 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 RBM15Q96T37 977 aaKnown RBP eCLIP17.97■□□□□ 0.473e-7■■■□□ 16.4
SMARCC2-202ENST00000347471 KRT82Q9NSB4 513 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 RASGRF2O14827 1237 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 IFI35P80217 286 aaPredicted RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 KLF1Q13351 362 aaPredicted RBP17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 CA9Q16790 459 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 PPP1R15BQ5SWA1 713 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 KBTBD7Q8WVZ9 684 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 P3H4Q92791 437 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 HOMER3Q9NSC5 361 aa17.97■□□□□ 0.47
SMARCC2-202ENST00000347471 TCRBV5S1A1TA0A578 114 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 CREB3O43889 395 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 ANKRD42Q8N9B4 389 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 TMPRSS4Q9NRS4 437 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 E7EVH7 732 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 F8W810 466 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 ZNF143P52747 638 aaPredicted RBP17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 SLC25A11Q02978 314 aaKnown RBP17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 SLMAPQ14BN4 828 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 HOOK3Q86VS8 718 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 KCNK16Q96T55 309 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 SH3GL2Q99962 352 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 VRTNQ9H8Y1 702 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 PCDH10Q9P2E7 1040 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 TRIP11Q15643 1979 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 ARL5CA6NH57 179 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 BEST1O76090 585 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 TRUB2O95900 331 aaKnown RBP17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 CCT5P48643 541 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 GJA9P57773 515 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 BST2Q10589 180 aaKnown RBP17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 ITGA7Q13683 1181 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 ZBED8Q8IZ13 594 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 NME8Q8N427 588 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
SMARCC2-202ENST00000347471 LRRC37A2A6NM11 1700 aa17.96■□□□□ 0.46
SMARCC2-202ENST00000347471 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
SMARCC2-202ENST00000347471 PPFIA2O75334 1257 aa17.95■□□□□ 0.46
SMARCC2-202ENST00000347471 ITIH2P19823 946 aa17.95■□□□□ 0.46
SMARCC2-202ENST00000347471 BCAT1P54687 386 aa17.95■□□□□ 0.46
SMARCC2-202ENST00000347471 ZBTB6Q15916 424 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms