RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SNX32Q86XE0 403 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 BHLHE22Q8NFJ8 381 aaPredicted RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 THUMPD3Q9BV44 507 aaKnown RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 TIMMDC1Q9NPL8 285 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 PCDHGB4Q9UN71 923 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 H0YIN7 160 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 NR5A2O00482 541 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 MYO1DO94832 1006 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 GH2P01242 217 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
COL12A1-202ENST00000345356 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 FAR2Q96K12 515 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 CHID1Q9BWS9 393 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 MPP6Q9NZW5 540 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 SHOC2Q9UQ13 582 aa12.52□□□□□ -0.41
COL12A1-202ENST00000345356 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SYNDIG1LA6NDD5 238 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RAD51BO15315 384 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SERPINE1P05121 402 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 LCP1P13796 627 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 CYP11B2P19099 503 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SFNP31947 248 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RGS7P49802 495 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 PKNOX1P55347 436 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 TMEM139Q8IV31 216 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RDM1Q8NG50 284 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 PDCD6IPQ8WUM4 868 aaKnown RBP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 NAT14Q8WUY8 206 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RORBQ92753 470 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 FRMD8P1Q9BZ68 369 aaPredicted RBP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 ERBB3P21860 1342 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 AVPR1AP37288 418 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 GLRBP48167 497 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 NFYCQ13952 458 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 GPAT2Q6NUI2 795 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 EEPD1Q7L9B9 569 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 CCDC28BQ9BUN5 200 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 DGCR6LQ9BY27 220 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 KLHL20Q9Y2M5 609 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RPS6KL1Q9Y6S9 549 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 HSMCR30P0CW71 290 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 CYP11B1P15538 503 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 DGKDQ16760 1214 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SWSAP1Q6NVH7 229 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 HPS1Q92902 700 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 SUPT3HB4E1H0 165 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 AGPSO00116 658 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 LYNP07948 512 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 GTF2H1P32780 548 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 N4BP2L1Q5TBK1 243 aaPredicted RBP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RNF19BQ6ZMZ0 732 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 BORCS5Q969J3 196 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 EPAS1Q99814 870 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 RIC8BQ9NVN3 520 aa12.51□□□□□ -0.41
COL12A1-202ENST00000345356 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
COL12A1-202ENST00000345356 UQCRBP14927 111 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RRM1P23921 792 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 CNTFP26441 200 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TPI1P60174 286 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 BNIP1Q12981 228 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 NTRK3Q16288 839 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 PDK4Q16654 411 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ARHGAP17Q68EM7 881 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF398Q8TD17 642 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SEPHS2Q99611 448 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SLC37A4O43826 429 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RPA1P27694 616 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms