RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 H7C0C1 242 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 PRPSAP2O60256 369 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 DNAJC8O75937 253 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ATP5OP48047 213 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ROR1Q01973 937 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 KRT81Q14533 505 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 GRIK4Q16099 956 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 TAZQ16635 292 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ZNF792Q3KQV3 632 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 PPP1R26Q5T8A7 1209 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SUGP1Q8IWZ8 645 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SGSM3Q96HU1 749 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 GRID1Q9ULK0 1009 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ARL2BPQ9Y2Y0 163 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 C2CD4BA6NLJ0 364 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 GOLGA8RI6L899 631 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 RDXP35241 583 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 XRCC4Q13426 336 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 CCDC142Q17RM4 750 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ZC3H12AQ5D1E8 599 aaKnown RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 PALM2Q8IXS6 379 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 CCDC63Q8NA47 563 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 ATP11CQ8NB49 1132 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SLC10A4Q96EP9 437 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 KLF6Q99612 283 aaPredicted RBP15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 CNPY3Q9BT09 278 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 APOL6Q9BWW8 343 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 MIS12Q9H081 205 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 VRTNQ9H8Y1 702 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SLCO1B3Q9NPD5 702 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 UBN1Q9NPG3 1134 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SNTG2Q9NY99 539 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 RABGEF1Q9UJ41 708 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 HEY1Q9Y5J3 304 aa15.57■□□□□ 0.08
VIPAS39-202ENST00000343765 SBF1O95248 1867 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 HCRTO43612 131 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 ASMTLO95671 621 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PFKMP08237 780 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 KRT4P19013 534 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 EPHX2P34913 555 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 GSCP56915 257 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 GEMIN4P57678 1058 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 NR1H3Q13133 447 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 SLC1A5Q15758 541 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PMF1Q6P1K2 205 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 CYP4V2Q6ZWL3 525 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 TDRPQ86YL5 185 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 RSAD1Q9HA92 442 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 SETD4Q9NVD3 440 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 TUBGCP4Q9UGJ1 667 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PDHXO00330 501 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 POU5F1BQ06416 359 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 INCA1Q0VD86 236 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 DPYSL3Q14195 570 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 FAXCQ5TGI0 409 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 LCLAT1Q6UWP7 414 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 SCUBE3Q8IX30 993 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PDIK1LQ8N165 341 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 C18orf25Q96B23 403 aaPredicted RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 PAFAH2Q99487 392 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 B3GNT5Q9BYG0 378 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 C12orf65Q9H3J6 166 aaKnown RBP15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 ECT2Q9H8V3 914 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 C2CD2Q9Y426 696 aa15.56■□□□□ 0.08
VIPAS39-202ENST00000343765 A0A1B0GUA9 196 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 AVILO75366 819 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 PHBP35232 272 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 SPARCL1Q14515 664 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 MTFR1Q15390 333 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 MARCH8Q5T0T0 291 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 TTC30AQ86WT1 665 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 IGDCC3Q8IVU1 814 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 CCDC33Q8N5R6 958 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 FITM2Q8N6M3 262 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 SHCBP1Q8NEM2 672 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 VTA1Q9NP79 307 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 WDR91A4D1P6 747 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 SNAI1O95863 264 aaPredicted RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 PCK1P35558 622 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 YARSP54577 528 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 CCNA1P78396 465 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 MGAT5Q09328 741 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 CCDC14Q49A88 953 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 EFHC2Q5JST6 749 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 DPP9Q86TI2 863 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 KIF2BQ8N4N8 673 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 C7orf31Q8N865 590 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 FAM172AQ8WUF8 416 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 EIF2AQ9BY44 585 aaKnown RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 FRMD8P1Q9BZ68 369 aaPredicted RBP15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 KLHL14Q9P2G3 628 aa15.55■□□□□ 0.08
VIPAS39-202ENST00000343765 NDC80O14777 642 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms