RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 TTYH3Q9C0H2 523 aa19.8■□□□□ 0.76
CDHR4-201ENST00000343366 CSNK1G1Q9HCP0 422 aa19.8■□□□□ 0.76
CDHR4-201ENST00000343366 DMAP1Q9NPF5 467 aaPredicted RBP19.8■□□□□ 0.76
CDHR4-201ENST00000343366 CAPN11Q9UMQ6 739 aa19.8■□□□□ 0.76
CDHR4-201ENST00000343366 LUC7L2Q9Y383 392 aaKnown RBP19.8■□□□□ 0.76
CDHR4-201ENST00000343366 MYH10P35580 1976 aa19.8■□□□□ 0.76
CDHR4-201ENST00000343366 GPR179Q6PRD1 2367 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 EPHB6O15197 1021 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 FGF19O95750 216 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 SPATA31D3P0C874 917 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 CSH1P0DML2 217 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 CSH2P0DML3 217 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 BDNFP23560 247 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 GRIK1P39086 918 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 BCAT1P54687 386 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 ZBED6P86452 979 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 SPATA31D4Q6ZUB0 917 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 SYN2Q92777 582 aaPredicted RBP19.79■□□□□ 0.76
CDHR4-201ENST00000343366 ZNF512Q96ME7 567 aaPredicted RBP19.79■□□□□ 0.76
CDHR4-201ENST00000343366 SEPT5Q99719 369 aaPredicted RBP19.79■□□□□ 0.76
CDHR4-201ENST00000343366 DUSP16Q9BY84 665 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 PRKD2Q9BZL6 878 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 GPR88Q9GZN0 384 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 SEMA4AQ9H3S1 761 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 KCNK12Q9HB15 430 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 FAM49BQ9NUQ9 324 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 COMMD8Q9NX08 183 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 YIPF1Q9Y548 306 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 CACNA1IQ9P0X4 2223 aa19.79■□□□□ 0.76
CDHR4-201ENST00000343366 CCDC195A0A1B0GUA6 201 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 RNF225M0QZC1 329 aaPredicted RBP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 CYP26A1O43174 497 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 AP1G2O75843 785 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 SEC24AO95486 1093 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 VNN2O95498 520 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 SETSIPP0DME0 302 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 CYP2F1P24903 491 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 CLCN1P35523 988 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 KRT9P35527 623 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 ZNF75DP51815 510 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 BST2Q10589 180 aaKnown RBP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 ORC1Q13415 861 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 TAF12Q16514 161 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 TSR1Q2NL82 804 aaKnown RBP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 TMC5Q6UXY8 1006 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 ZNF606Q8WXB4 792 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 KRT82Q9NSB4 513 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 AIPL1Q9NZN9 384 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 UXTQ9UBK9 157 aaPredicted RBP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 TSPAN16Q9UKR8 245 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 PCDHGC3Q9UN70 934 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 SLC27A5Q9Y2P5 690 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 CEP83Q9Y592 693 aa19.78■□□□□ 0.76
CDHR4-201ENST00000343366 BZW2Q9Y6E2 419 aaKnown RBP19.78■□□□□ 0.76
CDHR4-201ENST00000343366 ZFHX4Q86UP3 3567 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 O00370 1275 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 THAP12O43422 761 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 CCDC130P13994 396 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 ADORA2BP29275 332 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 SNX16P57768 344 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 TWF1Q12792 350 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 SFMBT2Q5VUG0 894 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 PAQR9Q6ZVX9 377 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 OTOP3Q7RTS5 596 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.77■□□□□ 0.76
CDHR4-201ENST00000343366 BAP1Q92560 729 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 PSMG2Q969U7 264 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 ZNF518BQ9C0D4 1074 aa19.77■□□□□ 0.76
CDHR4-201ENST00000343366 AJAP1Q9UKB5 411 aaPredicted RBP19.77■□□□□ 0.76
CDHR4-201ENST00000343366 ACACBO00763 2458 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 KRBA1A5PL33 1030 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 GFPT2O94808 682 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 RTN3O95197 1032 aaPredicted RBP19.76■□□□□ 0.75
CDHR4-201ENST00000343366 CYP11B1P15538 503 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 PTPN2P17706 415 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 CDC25BP30305 580 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 CNGA4Q8IV77 575 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 SCN4BQ8IWT1 228 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 SIX5Q8N196 739 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 LHX5Q9H2C1 402 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 PIDD1Q9HB75 910 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 AVENQ9NQS1 362 aaPredicted RBP19.76■□□□□ 0.75
CDHR4-201ENST00000343366 DLGAP2Q9P1A6 1054 aa19.76■□□□□ 0.75
CDHR4-201ENST00000343366 LRRC53A6NM62 1247 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 GOLGA6L6A8MZA4 724 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 CLDN5O00501 218 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 XPO1O14980 1071 aaKnown RBP19.75■□□□□ 0.75
CDHR4-201ENST00000343366 NARSO43776 548 aaKnown RBP19.75■□□□□ 0.75
CDHR4-201ENST00000343366 LMNAP02545 664 aaKnown RBP19.75■□□□□ 0.75
CDHR4-201ENST00000343366 GYPCP04921 128 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 BRD2P25440 801 aaKnown RBP19.75■□□□□ 0.75
CDHR4-201ENST00000343366 PPP3CCP48454 512 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 PPP1R2P3Q6NXS1 205 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 TRIM72Q6ZMU5 477 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 CLEC20AQ6ZU45 233 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 DENND5BQ6ZUT9 1274 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 SLC47A2Q86VL8 602 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
CDHR4-201ENST00000343366 SMG7Q92540 1137 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms