RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CENPIQ92674 756 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 AIF1LQ9BQI0 150 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 MTG1Q9BT17 334 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 LRRC1Q9BTT6 524 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 CLK4Q9HAZ1 481 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 GPHNQ9NQX3 736 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 BFARQ9NZS9 450 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 GNPTGQ9UJJ9 305 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NCAPD2Q15021 1401 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 DNMBPQ6XZF7 1577 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 INO80B-WBP1J3KQ70 363 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NPM3O75607 178 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 DGKIO75912 1065 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NADKO95544 446 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 IFNA14P01570 189 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 STOMP27105 288 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ITGA9Q13797 1035 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 LLGL1Q15334 1064 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 AFTPHQ6ULP2 937 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PI16Q6UXB8 463 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 RBM44Q6ZP01 1051 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 FAM43BQ6ZT52 329 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 CHMP1BQ7LBR1 199 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NET1Q7Z628 596 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAN-203ENST00000343200 DEFB107AQ8IZN7 70 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SNX31Q8N9S9 440 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ELMO2Q96JJ3 720 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SAR1AQ9NR31 198 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ARPP21Q9UBL0 812 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 AMACRQ9UHK6 382 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 GINS2Q9Y248 185 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 STARD13Q9Y3M8 1113 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PPIP5K1Q6PFW1 1433 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PRAG1Q86YV5 1406 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 FAM220BPB1ANY3 271 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 RPS6KA5O75582 802 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PLCL1Q15111 1095 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SURF1Q15526 300 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 TRIM62Q9BVG3 475 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PHACTR1Q9C0D0 580 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SP140LQ9H930 580 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 TSPAN19P0C672 248 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 MAGEA6P43360 314 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NAA20P61599 178 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ALDH6A1Q02252 535 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 ORC2Q13416 577 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 TYW3Q6IPR3 259 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 PRR5LQ6MZQ0 368 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 CDKL3Q8IVW4 592 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 C12orf50Q8NA57 414 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 TRPV3Q8NET8 790 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 Q96MT0 163 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 FRMD8Q9BZ67 464 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 AASDHPPTQ9NRN7 309 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ATP8A2Q9NTI2 1148 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ARHGEF40Q8TER5 1519 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 INO80Q9ULG1 1556 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 FOXN3O00409 490 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 ABL1P00519 1130 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PRIM2P49643 509 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ANXA11P50995 505 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 XIAPP98170 497 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 IL5RAQ01344 420 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 KCNMA1Q12791 1236 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 EFHBQ8N7U6 833 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 KRT35Q92764 455 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 C12orf66Q96MD2 445 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ACCSQ96QU6 501 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 CMTM6Q9NX76 183 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 NSFL1CQ9UNZ2 370 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 FNDC3AQ9Y2H6 1198 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 RBMX2Q9Y388 322 aaKnown RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 NEU2Q9Y3R4 380 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ADGRG1Q9Y653 693 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SULT1B1O43704 296 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SSX5O60225 188 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 UBOX5O94941 541 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 CCNE2O96020 404 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 RB1P06400 928 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 FESP07332 822 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ATG16L2Q8NAA4 619 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PRCCQ92733 491 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PHF23Q9BUL5 403 aaPredicted RBP6.36□□□□□ -1.39
VCAN-203ENST00000343200 GRID1Q9ULK0 1009 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 MYOM2P54296 1465 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 BCORL1Q5H9F3 1711 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 M0R2C6 588 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 KCNK1O00180 336 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 RGS10O43665 173 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 THEGLP0DJG4 465 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 TNNI3KQ59H18 835 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 MIS18BP1Q6P0N0 1132 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 LHFPL3Q86UP9 236 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 CAMK1DQ8IU85 385 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ZDHHC13Q8IUH4 622 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms