RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
LMX1A-202ENST00000342310 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 IRF6O14896 467 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 DCTN3O75935 186 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 MUTP22033 750 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 SERPINB6P35237 376 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 PGGT1BP53609 377 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 NR1H3Q13133 447 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
LMX1A-202ENST00000342310 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
LMX1A-202ENST00000342310 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
LMX1A-202ENST00000342310 KCNK1O00180 336 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ERBB2P04626 1255 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 YWHAEP62258 255 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PEX6Q13608 980 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ARMC3Q5W041 872 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 TEX2Q8IWB9 1127 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PPFIBP2Q8ND30 876 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 FAM172AQ8WUF8 416 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 CPT1BQ92523 772 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 MMP19Q99542 508 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 TMEM120AQ9BXJ8 343 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 DLGAP2Q9P1A6 1054 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 C15orf41Q9Y2V0 281 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 IQANK1A0A1B0GTG1 560 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 C5orf60A6NFR6 353 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 DNAJC8O75937 253 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ARIH2O95376 493 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 KDELR1P24390 212 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PTPN11Q06124 597 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 IGDCC3Q8IVU1 814 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ALLCQ8N6M5 410 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 MOCOSQ96EN8 888 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 TSPAN16Q9UKR8 245 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 DGKIO75912 1065 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PAEPP09466 180 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 MSX2P35548 267 aaPredicted RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PGM1P36871 562 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 OLIG2Q13516 323 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 C6orf163Q5TEZ5 329 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
LMX1A-202ENST00000342310 RNF148Q8N7C7 305 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 CENPTQ96BT3 561 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
LMX1A-202ENST00000342310 MED7O43513 233 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 MICAL2O94851 1124 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 UNC5CO95185 931 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 ASS1P00966 412 aaKnown RBP13.07□□□□□ -0.32
LMX1A-202ENST00000342310 KPNB1Q14974 876 aaKnown RBP13.07□□□□□ -0.32
LMX1A-202ENST00000342310 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 TSNAXIP1Q2TAA8 658 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 PLEKHA7Q6IQ23 1121 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 GMLQ99445 158 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 RNPEPQ9H4A4 650 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 PLSCR1O15162 318 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 AP1G2O75843 785 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 KRT36O76013 467 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 INSRRP14616 1297 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 CDKN2BP42772 138 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 CYP1B1Q16678 543 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 RASIP1Q5U651 963 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 TIPINQ9BVW5 301 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 LAMB1P07942 1786 aa13.07□□□□□ -0.32
LMX1A-202ENST00000342310 CLGNO14967 610 aa13.06□□□□□ -0.32
LMX1A-202ENST00000342310 LYPLA1O75608 230 aaPredicted RBP13.06□□□□□ -0.32
LMX1A-202ENST00000342310 KRT37O76014 449 aa13.06□□□□□ -0.32
LMX1A-202ENST00000342310 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
LMX1A-202ENST00000342310 AQP5P55064 265 aa13.06□□□□□ -0.32
LMX1A-202ENST00000342310 DSTYKQ6XUX3 929 aa13.06□□□□□ -0.32
LMX1A-202ENST00000342310 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms