RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MED10Q9BTT4 135 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 PRDM10Q9NQV6 1147 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 PRDM4Q9UKN5 801 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 DNPEPQ9ULA0 475 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 KDELR1P24390 212 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 HSD17B3P37058 310 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 DRG2P55039 364 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 UAP1Q16222 522 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 IQCKQ8N0W5 287 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 KCTD6Q8NC69 237 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 ATL2Q8NHH9 583 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 UNC93B1Q9H1C4 597 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 MED4Q9NPJ6 270 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 ASIC3Q9UHC3 531 aa23.52■■□□□ 1.36
PDLIM2-203ENST00000339162 MYBPHLA2RUH7 354 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 RPL9P32969 192 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 COPS2P61201 443 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 TMC3Q7Z5M5 1100 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 SLCO2A1Q92959 643 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ARVCFO00192 962 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 RNF40O75150 1001 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 KRT14P02533 472 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ITGB1P05556 798 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 YY1P25490 414 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 SDC4P31431 198 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ACAP1Q15027 740 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ALS2CLQ60I27 953 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 CYP4V2Q6ZWL3 525 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ZNF598Q86UK7 904 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 FAM71BQ8TC56 605 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 FAM172AQ8WUF8 416 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 UBLCP1Q8WVY7 318 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 LINC01599Q8WXQ3 324 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 SYT15Q9BQS2 421 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 CALN1Q9BXU9 219 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 DUSP16Q9BY84 665 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 DNAI2Q9GZS0 605 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 ATP8A1Q9Y2Q0 1164 aa23.51■■□□□ 1.35
PDLIM2-203ENST00000339162 KBTBD13C9JR72 458 aa23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 PCK1P35558 622 aa23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 RUFY1Q96T51 708 aa23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 ADAM33Q9BZ11 813 aa23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 HOMER3Q9NSC5 361 aa23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.5■■□□□ 1.35
PDLIM2-203ENST00000339162 LIASO43766 372 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 MAP3K7CLP57077 242 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 SNX16P57768 344 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 ADIGQ0VDE8 80 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 MMRN1Q13201 1228 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 ARHGEF6Q15052 776 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 OR2W6PQ8NHA6 318 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 LRRC45Q96CN5 670 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 RGS18Q9NS28 235 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 GPATCH2LQ9NWQ4 482 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 PLAAQ9Y263 795 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 SQORQ9Y6N5 450 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 XPO1O14980 1071 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 PRPSAP2O60256 369 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 CST8O60676 142 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 GAS8O95995 478 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 NPR3P17342 541 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 LHX1P48742 406 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 NDUFV1P49821 464 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 ATXN1P54253 815 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 GRIK3Q13003 919 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 CD300LGQ6UXG3 332 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 CLEC20AQ6ZU45 233 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 GSTA5Q7RTV2 222 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 TMEM86AQ8N2M4 240 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 CMASQ8NFW8 434 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 GRK7Q8WTQ7 553 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 PCED1BQ96HM7 432 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 KRT82Q9NSB4 513 aa23.49■■□□□ 1.35
PDLIM2-203ENST00000339162 B4GALT3O60512 393 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 CAND2O75155 1236 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 PTPN7P35236 360 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 TUSC3Q13454 348 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 BYSLQ13895 437 aaKnown RBP23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 ZDHHC17Q8IUH5 632 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 GLIS1Q8NBF1 620 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 PHF24Q9UPV7 400 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 ZNF148Q9UQR1 794 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 C9IYK1 514 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 RPL34P49207 117 aaKnown RBP23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 PLCB3Q01970 1234 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 DMTNQ08495 405 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 PTK6Q13882 451 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 MTFR1Q15390 333 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 SLC26A9Q7LBE3 791 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 HSFY1Q96LI6 401 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 KCNK16Q96T55 309 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 RHOBTB2Q9BYZ6 727 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 C10orf88Q9H8K7 445 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 TMEM30AQ9NV96 361 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 FEZ2Q9UHY8 353 aaPredicted RBP23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 NEU2Q9Y3R4 380 aa23.48■■□□□ 1.35
PDLIM2-203ENST00000339162 TP73O15350 636 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 SKIP12755 728 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 IVDP26440 423 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms