RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TMEM191BP0C7N4 346 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 GEMIN4P57678 1058 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 NOMO3P69849 1222 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 KRT76Q01546 638 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 OGDHQ02218 1023 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PTK7Q13308 1070 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SGSM1Q2NKQ1 1148 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ARHGAP22Q7Z5H3 698 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 KATNAL2Q8IYT4 538 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 TEX9Q8N6V9 391 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 STK32AQ8WU08 396 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 UCMAQ8WVF2 138 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 CLPTM1LQ96KA5 538 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 NLRP4Q96MN2 994 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SYNJ2BP-COX16A0A087WUM0 186 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 IGKV6D-21A0A0A0MT36 114 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 INO80B-WBP1J3KQ70 363 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PRPF4O43172 522 aaKnown RBP eCLIP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EDF1O60869 148 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 MYL2P10916 166 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ETS2P15036 469 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 JAK3P52333 1124 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EPHB1P54762 984 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EIF3EP60228 445 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 GRAMD1BQ3KR37 738 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 SYDE1Q6ZW31 735 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ARID3BQ8IVW6 561 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 RCOR2Q8IZ40 523 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EXD1Q8NHP7 514 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 SLITRK1Q96PX8 696 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 CYP4F11Q9HBI6 524 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 COX16Q9P0S2 106 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 B2RBV5 119 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 RBP3P10745 1247 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 KRT3P12035 628 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 CDH5P33151 784 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PGM1P36871 562 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ABL2P42684 1182 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 CACNA2D1P54289 1103 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 DYNC1I2Q13409 638 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PSMD6Q15008 389 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ZACNQ401N2 412 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ALYREFQ86V81 257 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PHF13Q86YI8 300 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 TMEM35BQ8NCS4 154 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PTPRN2Q92932 1015 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 THTPAQ9BU02 230 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 TMEM120AQ9BXJ8 343 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 TMEM165Q9HC07 324 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 JPH1Q9HDC5 661 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 MAP3K20Q9NYL2 800 aaKnown RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 PSAPP07602 524 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 APRTP07741 180 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ELK3P41970 407 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 GPX6P59796 221 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 EMC2Q15006 297 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 UNC45BQ8IWX7 931 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ZNF513Q8N8E2 541 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 SPATA18Q8TC71 538 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 ATXN7L3BQ96GX2 97 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 CENPKQ9BS16 269 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
HIF1A-202ENST00000337138 MEI4A8MW99 385 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 I3L4J1 428 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 COPEO14579 308 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ZC3H11AO75152 810 aaKnown RBP eCLIP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 GJB1P08034 283 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 RGS7P49802 495 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 RPS6KA3P51812 740 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 HMGCS2P54868 508 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ACTR2P61160 394 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 MROH9Q5TGP6 573 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 SNX30Q5VWJ9 437 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 JOSD2Q8TAC2 188 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CYP39A1Q9NYL5 469 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 FAF1Q9UNN5 650 aaPredicted RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 SMG5Q9UPR3 1016 aaKnown RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PSTPIP1O43586 416 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 EXTL3O43909 919 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PEX11AO75192 247 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ATXN3P54252 364 aaPredicted RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 BLMHQ13867 455 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PDK4Q16654 411 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 KBTBD12Q3ZCT8 623 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms