RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SHROOM3Q8TF72 1996 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 LZTR1Q8N653 840 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CEP44Q9C0F1 390 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 PSMD12O00232 456 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 SNUPNO95149 360 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 CYTH1Q15438 398 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CCDC3Q9BQI4 270 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CCDC195A0A1B0GUA6 201 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 SDR42E2A6NKP2 422 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 TMEM253P0C7T8 217 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 PRIM2P49643 509 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 GANQ9H2C0 597 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ATP5BP06576 529 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 RAG1P15918 1043 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 PGM1P36871 562 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 LRRC6Q86X45 466 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 AGAP3Q96P47 875 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 DDIT4Q9NX09 232 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 DYRK1BQ9Y463 629 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 SDK1Q7Z5N4 2213 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 TMEM114B3SHH9 223 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ITGB3P05106 788 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 RPSAP08865 295 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 RRM1P23921 792 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 PTPN3P26045 913 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 PCYT1AP49585 367 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CCDC60Q8IWA6 550 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 EPN3Q9H201 632 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 RNF112Q9ULX5 631 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 AURKCQ9UQB9 309 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 NMT1P30419 496 aaKnown RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 PTK7Q13308 1070 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 NR1I3Q14994 352 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 METTL7BQ6UX53 244 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 CPA5Q8WXQ8 436 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 GUCY1B2O75343 617 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PLD3Q8IV08 490 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 GALCP54803 685 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
FN1-202ENST00000336916 SMARCD1Q96GM5 515 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 RMDN2Q96LZ7 410 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PRR23D1E9PI22 279 aaPredicted RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 RBP1P09455 135 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PRR23D2P0DMB1 279 aaPredicted RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 FCGR1AP12314 374 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 EPHB2P29323 1055 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 GNA13Q14344 377 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 SHC4Q6S5L8 630 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 LRRC8DQ7L1W4 858 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 H7C0S8 307 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 H3BMM5 538 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 NTSR2O95665 410 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
FN1-202ENST00000336916 NCF4Q15080 339 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 MYO1HQ8N1T3 1032 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 VPS33AQ96AX1 596 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 PPP1R16AQ96I34 528 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 ELOVL4Q9GZR5 314 aa12.69□□□□□ -0.38
FN1-202ENST00000336916 CYB561D2O14569 222 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 RASA1P20936 1047 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 RHOBTB1O94844 696 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CHRM3P20309 590 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ITGALP20701 1170 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CCR1P32246 355 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 SOX6P35712 828 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 DAB2P98082 770 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 TMED1Q13445 227 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 MCL1Q07820 350 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms