RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SCN1AP35498 2009 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 KCNE1P15382 129 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 BEX3Q00994 111 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 TFDP2Q14188 446 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 PDCD11Q14690 1871 aaKnown RBP17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 C15orf59Q2T9L4 293 aaPredicted RBP17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 XKR4Q5GH76 650 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 C17orf99Q6UX52 265 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 EXOC3L1Q86VI1 746 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 P3H4Q92791 437 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 PIWIL1Q96J94 861 aaKnown RBP17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 INTS9Q9NV88 658 aaKnown RBP17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 LGALS13Q9UHV8 139 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 NME7Q9Y5B8 376 aa17.46■□□□□ 0.39
TMEM39B-201ENST00000336294 MCF2LO15068 1137 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 GRAP2O75791 330 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 ENDOD1O94919 500 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 PSMC4P43686 418 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 CDH6P55285 790 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 EIF3EP60228 445 aaKnown RBP17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC14Q49A88 953 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 FAM47CQ5HY64 1035 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 UBXN11Q5T124 520 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 SH3PXD2AQ5TCZ1 1133 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 CYP4V2Q6ZWL3 525 aaPredicted RBP17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 PACS2Q86VP3 889 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 ATXN2LQ8WWM7 1075 aaKnown RBP17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 ARHGEF2Q92974 986 aaKnown RBP17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 GDAP2Q9NXN4 497 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 KLK14Q9P0G3 267 aa17.45■□□□□ 0.38
TMEM39B-201ENST00000336294 KPNA7A9QM74 516 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CDH16O75309 829 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 SDC4P31431 198 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 PDE4CQ08493 712 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 PDK2Q15119 407 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 FSCN1Q16658 493 aaKnown RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CDO1Q16878 200 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 SV2CQ496J9 727 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC38Q502W7 563 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 BOLA3Q53S33 107 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CYP4F22Q6NT55 531 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 C6orf89Q6UWU4 347 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CENPUQ71F23 418 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 MAP7D3Q8IWC1 876 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 PPIL6Q8IXY8 311 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 RIBC1Q8N443 379 aaPredicted RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 TEKT4Q8WW24 435 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 PRCCQ92733 491 aaPredicted RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CHMP6Q96FZ7 201 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 SNX25Q9H3E2 840 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 GJD2Q9UKL4 321 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 HOXC8P31273 242 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 GNL1P36915 607 aaPredicted RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 TAF6P49848 677 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 BCAT1P54687 386 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 GDF10P55107 478 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 BST2Q10589 180 aaKnown RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 DPYSL3Q14195 570 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 KRT81Q14533 505 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 CRYBG2Q8N1P7 616 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 KBTBD7Q8WVZ9 684 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 PHACTR1Q9C0D0 580 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 DPEP3Q9H4B8 488 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 FARP1Q9Y4F1 1045 aaPredicted RBP17.44■□□□□ 0.38
TMEM39B-201ENST00000336294 ANKRD65E5RJM6 399 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 SMAPO00193 183 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 PAPSS1O43252 624 aaPredicted RBP17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 LIG3P49916 1009 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 ATP11AP98196 1134 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC142Q17RM4 750 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 CNPY4Q8N129 248 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 ANKRD52Q8NB46 1076 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 APPL2Q8NEU8 664 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 SPATA18Q8TC71 538 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 FAM172AQ8WUF8 416 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 TBCBQ99426 244 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC134Q9H6E4 229 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 ACTR5Q9H9F9 607 aaPredicted RBP17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 NGRNQ9NPE2 291 aaKnown RBP17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 CYLDQ9NQC7 956 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 CTNNAL1Q9UBT7 734 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 IPPQ9Y573 584 aa17.43■□□□□ 0.38
TMEM39B-201ENST00000336294 TNPO2O14787 897 aaKnown RBP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 ALOX15BO15296 676 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 IGHA2P01877 340 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 RBP3P10745 1247 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 RPL22P35268 128 aaKnown RBP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SCNN1AP37088 669 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 PURAQ00577 322 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms