RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CAPSQ13938 189 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 RCN2Q14257 317 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 OLFML2BQ68BL8 750 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAM13CQ8NE31 585 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 LRRN4Q8WUT4 740 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 TSSK1BQ9BXA7 367 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 MRPL4Q9BYD3 311 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 SLC13A1Q9BZW2 595 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 GYG2O15488 501 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 PRPF4O43172 522 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 CSDE1O75534 798 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 HAUS5O94927 633 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZWINTO95229 277 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 EDN1P05305 212 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAM200BP0CF97 657 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 TGFB2P61812 414 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 PTK7Q13308 1070 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 CPT1BQ92523 772 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAF2Q96CS3 445 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 GBP5Q96PP8 586 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 LIN7AO14910 233 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 ITGAVP06756 1048 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 UBTFL6P0CB48 400 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 CA8P35219 290 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 CDH6P55285 790 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 TAF5Q15542 800 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 OASLQ15646 514 aaKnown RBP17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 FOXB2Q5VYV0 432 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 TTC13Q8NBP0 860 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 DTX3LQ8TDB6 740 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 DENND1AQ8TEH3 1009 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 STRIP2Q9ULQ0 834 aa17.24■□□□□ 0.35
CDC42EP4-201ENST00000335793 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 KITP10721 976 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCNB1P14635 433 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 ELK3P41970 407 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 CPA2P48052 419 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 IRX4P78413 519 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAM102AQ5T9C2 384 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 UTP4Q969X6 686 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 CYTH2Q99418 400 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 VCXQ9H320 206 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 RABGEF1Q9UJ41 708 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 ADCY3O60266 1144 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 AVILO75366 819 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 PRKCBP05771 671 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 IL1R2P27930 398 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 SKIV2L2P42285 1042 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 IGBP1P78318 339 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 PTPN20Q4JDL3 420 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 DCAF15Q66K64 600 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 NPNTQ6UXI9 565 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 SDCCAG8Q86SQ7 713 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 RELL1Q8IUW5 271 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 UBA3Q8TBC4 463 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 SPATA31C2B4DYI2 1134 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 LRCH4O75427 683 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 TOM1L1O75674 476 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■□ 20.4
CDC42EP4-201ENST00000335793 ESRRAP11474 423 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 DESP17661 470 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 KRT81Q14533 505 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 BRSK2Q8IWQ3 736 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 DHX33Q9H6R0 707 aaKnown RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 RNPEPL1Q9HAU8 725 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 FBXO6Q9NRD1 293 aaPredicted RBP17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 SCOCQ9UIL1 159 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 CLUHO75153 1309 aa17.23■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 NDC80O14777 642 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 GJB1P08034 283 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 BGNP21810 368 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 KDELR1P24390 212 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 TAP1Q03518 808 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 MMRN1Q13201 1228 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 SMAD1Q15797 465 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 OR6B2Q6IFH4 312 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 STMN2Q93045 179 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 ADPGKQ9BRR6 497 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 MARCOQ9UEW3 520 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms