RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 DBR1Q9UK59 544 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 IQCMA0A1B0GVH7 501 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 RRM2P31350 389 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PTK7Q13308 1070 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 TYW3Q6IPR3 259 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 OSCP1Q8WVF1 389 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 LRMDAQ9H2I8 198 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 RTN2O75298 545 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SYCE2Q6PIF2 218 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 XKRXQ6PP77 449 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 REXO1L1PQ8IX06 675 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 NEDD1Q8NHV4 660 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MARCH7Q9H992 704 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 TNNQ9UQP3 1299 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ARHGEF40Q8TER5 1519 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PENKP01210 267 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PDGFRBP09619 1106 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SGO1Q5FBB7 561 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 RCOR2Q8IZ40 523 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MIER2Q8N344 545 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 KRT35Q92764 455 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PGM2Q96G03 612 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 CITED4Q96RK1 184 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ENTPD7Q9NQZ7 604 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 WDR35Q9P2L0 1181 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 CHL1O00533 1208 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 PRKAR1AP10644 381 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MYL4P12829 197 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 TBXAS1P24557 533 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC9A3P48764 834 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 CASP4P49662 377 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 DPYSQ14117 519 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SPAG16Q8N0X2 631 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MREGQ8N565 214 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 FOPNLQ96NB1 174 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 WDR17Q8IZU2 1322 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ABATP80404 500 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CHRNB3Q05901 458 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 EXOC3L1Q86VI1 746 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CHMP1AQ9HD42 196 aaPredicted RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SASH3O75995 380 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 FBLN1P23142 703 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 RPL26P61254 145 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 YWHAZP63104 245 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 RBM43Q6ZSC3 357 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 DHDDSQ86SQ9 333 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CLHC1Q8NHS4 586 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 RFT1Q96AA3 541 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC9A7Q96T83 725 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 KLHL1Q9NR64 748 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ACTL7BQ9Y614 415 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 QPRTQ15274 297 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ITPRIPL1Q6GPH6 555 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 JAMLQ86YT9 394 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 PHF11Q9UIL8 331 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CCDC189A1A4V9 331 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SEC24AO95486 1093 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 KNOP1Q1ED39 458 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 EIF2S3LQ2VIR3 472 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 AAGABQ6PD74 315 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 MACC1Q6ZN28 852 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 THEM5Q8N1Q8 247 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 TATDN2Q93075 761 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SPATA16Q9BXB7 569 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 GPAMQ9HCL2 828 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 PKP3Q9Y446 797 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SNX13Q9Y5W8 968 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SRGNP10124 158 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 MAPK6Q16659 721 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ESRP1Q6NXG1 681 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 LRRC17Q8N6Y2 441 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 MS4A14Q96JA4 679 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 UBXN6Q9BZV1 441 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ATP9BO43861 1147 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF23P17027 643 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 EPHX4Q8IUS5 362 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 PNPT1Q8TCS8 783 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 A0A1W2PQ72 361 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CHI3L1P36222 383 aaPredicted RBP10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ERICH5Q6P6B1 374 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 ATG14Q6ZNE5 492 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 AP3M1Q9Y2T2 418 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 E2F8A0AVK6 867 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 RAB27AP51159 221 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
SPTBN1-201ENST00000333896 CD274Q9NZQ7 290 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms