RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 FOXO6A8MYZ6 492 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 ENDOD1O94919 500 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 AKAP5P24588 427 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CTCFP49711 727 aaPredicted RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 CDH6P55285 790 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 IRF5Q13568 498 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CENPUQ71F23 418 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 PCGF5Q86SE9 256 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CACNA2D3Q8IZS8 1091 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 OTUD6BQ8N6M0 293 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 TMEM40Q8WWA1 233 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 SLC4A5Q9BY07 1137 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 EURLQ9NYK6 297 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 UBQLN1Q9UMX0 589 aaKnown RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 PIN4Q9Y237 131 aaKnown RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 DOCK3Q8IZD9 2030 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 MCF2LO15068 1137 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 PRPSAP2O60256 369 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 SETSIPP0DME0 302 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 IFNAR2P48551 515 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 MNAT1P51948 309 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 EIF3EP60228 445 aaKnown RBP18.2■□□□□ 0.5
DDX28-201ENST00000332395 ADAM17P78536 824 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 MMRN1Q13201 1228 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 SOWAHAQ2M3V2 549 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 CCDC14Q49A88 953 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 HP1BP3Q5SSJ5 553 aaPredicted RBP18.2■□□□□ 0.5
DDX28-201ENST00000332395 ZBED8Q8IZ13 594 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 OR6B3Q8NGW1 331 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 SLC35F5Q8WV83 523 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 HESX1Q9UBX0 185 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 EXOC1LA0A1B0GW35 172 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 ALOX15BO15296 676 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 FSBPO95073 299 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 AXLP30530 894 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 PSEN2P49810 448 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 ATP11AP98196 1134 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 SNX17Q15036 470 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 TMEM110Q86TL2 294 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 UNC93AQ86WB7 457 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 UNC45BQ8IWX7 931 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 PPIL6Q8IXY8 311 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 SPATA18Q8TC71 538 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 MAK16Q9BXY0 300 aaKnown RBP18.2■□□□□ 0.5
DDX28-201ENST00000332395 CAPN7Q9Y6W3 813 aa18.2■□□□□ 0.5
DDX28-201ENST00000332395 GOLGA8MH3BSY2 632 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 DPYSL4O14531 572 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 RBP3P10745 1247 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 BRAFP15056 766 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 RPL22P35268 128 aaKnown RBP18.19■□□□□ 0.5
DDX28-201ENST00000332395 SLC6A3Q01959 620 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 PDIA2Q13087 525 aaKnown RBP18.19■□□□□ 0.5
DDX28-201ENST00000332395 DPYSL3Q14195 570 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 HIF1AQ16665 826 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 SESTD1Q86VW0 696 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 SCUBE3Q8IX30 993 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 RIBC1Q8N443 379 aaPredicted RBP18.19■□□□□ 0.5
DDX28-201ENST00000332395 CPT1BQ92523 772 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 CABS1Q96KC9 395 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
DDX28-201ENST00000332395 PDCD11Q14690 1871 aaKnown RBP18.19■□□□□ 0.5
DDX28-201ENST00000332395 A8MXQ7 604 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 HAS3O00219 553 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 PAPSS1O43252 624 aaPredicted RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 TREHO43280 583 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 LRRC14Q15048 493 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 ANKRD22Q5VYY1 191 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 LRRC34Q8IZ02 419 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 FAM71DQ8N9W8 422 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 MGARPQ8TDB4 240 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 KCNK9Q9NPC2 374 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 NGRNQ9NPE2 291 aaKnown RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 PIRO00625 290 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 HCRTO43612 131 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 CD4P01730 458 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 GCAP28676 217 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 SDC4P31431 198 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 RDXP35241 583 aaKnown RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 CPT1AP50416 773 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 TFDP2Q14188 446 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 CCL14Q16627 93 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 RNF187Q5TA31 235 aaPredicted RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 ARHGAP17Q68EM7 881 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 NPNTQ6UXI9 565 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 SRRM1Q8IYB3 904 aaKnown RBP18.18■□□□□ 0.5
DDX28-201ENST00000332395 NAT8LQ8N9F0 302 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 STK32AQ8WU08 396 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 FAM172AQ8WUF8 416 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 KHSRPQ92945 711 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDX28-201ENST00000332395 LPIN3Q9BQK8 851 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 VPS37BQ9H9H4 285 aa18.18■□□□□ 0.5
DDX28-201ENST00000332395 GABBR2O75899 941 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms