RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 UBXN6Q9BZV1 441 aa27.4■■□□□ 1.98
SMDT1-201ENST00000331479 IL37Q9NZH6 218 aa27.4■■□□□ 1.98
SMDT1-201ENST00000331479 PCDHGC3Q9UN70 934 aa27.4■■□□□ 1.98
SMDT1-201ENST00000331479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.4■■□□□ 1.98
SMDT1-201ENST00000331479 A0A1W2PRU2 124 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 GABRR2P28476 465 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 KRT9P35527 623 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 PLA2G4AP47712 749 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 PMF1Q6P1K2 205 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 POTEHQ6S545 545 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 GET4Q7L5D6 327 aaPredicted RBP27.39■■□□□ 1.98
SMDT1-201ENST00000331479 LEMD2Q8NC56 503 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 SHKBP1Q8TBC3 707 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 ING5Q8WYH8 240 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 CYTH4Q9UIA0 394 aa27.39■■□□□ 1.98
SMDT1-201ENST00000331479 MRPS23Q9Y3D9 190 aaKnown RBP27.39■■□□□ 1.98
SMDT1-201ENST00000331479 ZNF638Q14966 1978 aaKnown RBP27.39■■□□□ 1.98
SMDT1-201ENST00000331479 TADA3O75528 432 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 F11P03951 625 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 MMEP08473 750 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 SP100P23497 879 aaPredicted RBP27.39■■□□□ 1.97
SMDT1-201ENST00000331479 CASP14P31944 242 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 MEA1Q16626 185 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 WDTC1Q8N5D0 677 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 AIPL1Q9NZN9 384 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 FAM50BQ9Y247 325 aa27.39■■□□□ 1.97
SMDT1-201ENST00000331479 GABBR2O75899 941 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 RTN3O95197 1032 aaPredicted RBP27.38■■□□□ 1.97
SMDT1-201ENST00000331479 BMP1P13497 986 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 FERP16591 822 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 CEBPBP17676 345 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 CHRNB2P17787 502 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 YWHAQP27348 245 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 RGS7P49802 495 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 KIF11P52732 1056 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 TAF10Q12962 218 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 IQCDQ96DY2 449 aa27.38■■□□□ 1.97
SMDT1-201ENST00000331479 PHF7Q9BWX1 381 aaPredicted RBP27.38■■□□□ 1.97
SMDT1-201ENST00000331479 ZNF197O14709 1029 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 ZBED6P86452 979 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 RAB41Q5JT25 222 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 SFMBT2Q5VUG0 894 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMDT1-201ENST00000331479 MRFAP1L1Q96HT8 127 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 LHX5Q9H2C1 402 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 ATXN3LQ9H3M9 355 aa27.37■■□□□ 1.97
SMDT1-201ENST00000331479 UXTQ9UBK9 157 aaPredicted RBP27.37■■□□□ 1.97
SMDT1-201ENST00000331479 LUC7L2Q9Y383 392 aaKnown RBP27.37■■□□□ 1.97
SMDT1-201ENST00000331479 FAM92AA1XBS5 289 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 CDR2Q01850 454 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 TEAD2Q15562 447 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 STXBP5Q5T5C0 1151 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 TMC6Q7Z403 805 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 KCTD13Q8WZ19 329 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 FGF13Q92913 245 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 MYADMQ96S97 322 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 COMMD8Q9NX08 183 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 EHD2Q9NZN4 543 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 USP3Q9Y6I4 520 aa27.36■■□□□ 1.97
SMDT1-201ENST00000331479 PIK3R2O00459 728 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 CDC25CP30307 473 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 PGFP49763 221 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 CYP4F8P98187 520 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FMO1Q01740 532 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 ASIC2Q16515 512 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 ZNF677Q86XU0 584 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 NPAS3Q8IXF0 933 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 ZNF397Q8NF99 534 aaPredicted RBP27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FBXO32Q969P5 355 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 PDCL3Q9H2J4 239 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 CHORDC1Q9UHD1 332 aaPredicted RBP27.35■■□□□ 1.97
SMDT1-201ENST00000331479 OBSL1O75147 1896 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FAM170AA1A519 330 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FGF19O95750 216 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 TKTL1P51854 596 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 ADIGQ0VDE8 80 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 TRIM14Q14142 442 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 C1orf131Q8NDD1 294 aaKnown RBP27.35■■□□□ 1.97
SMDT1-201ENST00000331479 RPGRIP1Q96KN7 1286 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FBXO44Q9H4M3 255 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 LRRC4Q9HBW1 653 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.35■■□□□ 1.97
SMDT1-201ENST00000331479 SCML2Q9UQR0 700 aa27.35■■□□□ 1.97
SMDT1-201ENST00000331479 USP17L7P0C7H9 530 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 CCDC172P0C7W6 258 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 LCP1P13796 627 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 GBP2P32456 591 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-201ENST00000331479 GOLGA8FQ08AF8 430 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 GOLGA8DPQ0D2H9 430 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 TBX2Q13207 712 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-201ENST00000331479 FMNL3Q8IVF7 1028 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 MCRS1Q96EZ8 462 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 HSFY1Q96LI6 401 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 ZSWIM3Q96MP5 696 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 SLITRK1Q96PX8 696 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 ULBP1Q9BZM6 244 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 GMIPQ9P107 970 aa27.34■■□□□ 1.97
SMDT1-201ENST00000331479 TCF20Q9UGU0 1960 aaKnown RBP27.34■■□□□ 1.97
SMDT1-201ENST00000331479 DOCK8Q8NF50 2099 aa27.33■■□□□ 1.97
SMDT1-201ENST00000331479 SKILP12757 684 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms