RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NR1H2P55055 460 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 SH2D5Q6ZV89 423 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 ZNF410Q86VK4 478 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 C12orf56Q8IXR9 622 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 PPIL6Q8IXY8 311 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 NT5C1BQ96P26 610 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 RAB20Q9NX57 234 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 SGK1O00141 431 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 CD48P09326 243 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 KRT10P13645 584 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 ATF7P17544 494 aaPredicted RBP25.34■■□□□ 1.65
SOX1-201ENST00000330949 CIITAP33076 1130 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 UBAP2LQ14157 1087 aaKnown RBP25.34■■□□□ 1.65
SOX1-201ENST00000330949 PGM2L1Q6PCE3 622 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 SHKBP1Q8TBC3 707 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 SRPK1Q96SB4 655 aaKnown RBP25.34■■□□□ 1.65
SOX1-201ENST00000330949 SNCAIPQ9Y6H5 919 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 ZNF831Q5JPB2 1677 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 K7ENM7 598 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 DNAJA2O60884 412 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 FOSP01100 380 aaPredicted RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 ITGAVP06756 1048 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 INHBAP08476 426 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 NSFP46459 744 aaKnown RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 ALDH1A3P47895 512 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 UBXN2AP68543 259 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 OASLQ15646 514 aaKnown RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 CNGA3Q16281 694 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 RTKN2Q8IZC4 609 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 TTC13Q8NBP0 860 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 DCUN1D1Q96GG9 259 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 NLRP4Q96MN2 994 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 UBAP1Q9NZ09 502 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 PPEF1O14829 653 aaPredicted RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 ZBTB39O15060 712 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 BBOX1O75936 387 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 PSMD7P51665 324 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 PATL1Q86TB9 770 aaKnown RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 CERKQ8TCT0 537 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 PLEKHO2Q8TD55 490 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 CPA5Q8WXQ8 436 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.33■■□□□ 1.65
SOX1-201ENST00000330949 USTQ9Y2C2 406 aa25.33■■□□□ 1.65
SOX1-201ENST00000330949 HLA-DOAP06340 250 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 KRT5P13647 590 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 OXCT1P55809 520 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 BTKQ06187 659 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 BTG3Q14201 252 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 MSS51Q4VC12 460 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 CCDC92Q53HC0 331 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 FNBP1LQ5T0N5 605 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 ZFYVE27Q5T4F4 411 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 LIN9Q5TKA1 542 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 SLFN13Q68D06 897 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 TRMT1LQ7Z2T5 733 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 ACTRT2Q8TDY3 377 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 SEMA4DQ92854 862 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 CBWD1Q9BRT8 395 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 OXCT2Q9BYC2 517 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 MRPL47Q9HD33 250 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 GINM1Q9NU53 330 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 HSPBP1Q9NZL4 362 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 CDH22Q9UJ99 828 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 E7ESA3 106 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 KITP10721 976 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 CDH2P19022 906 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 COPAP53621 1224 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 LTBP4Q8N2S1 1624 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 NKD2Q969F2 451 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 CCDC124Q96CT7 223 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 C6orf203Q9P0P8 240 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 SF3B1O75533 1304 aaKnown RBP eCLIP25.32■■□□□ 1.64
SOX1-201ENST00000330949 RBM47A0AV96 593 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 DDTLA6NHG4 134 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 ZNF76P36508 570 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 USP41Q3LFD5 358 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 KRT39Q6A163 491 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 Q6ZNX1 250 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 ERI1Q8IV48 349 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 SLITRK1Q96PX8 696 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 NACC1Q96RE7 527 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 MARCOQ9UEW3 520 aaPredicted RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 POMPQ9Y244 141 aa25.32■■□□□ 1.64
SOX1-201ENST00000330949 TDRKHQ9Y2W6 561 aaKnown RBP25.32■■□□□ 1.64
SOX1-201ENST00000330949 SH3PXD2BA1X283 911 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 SDR42E2A6NKP2 422 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 ACADVLP49748 655 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 ALCAMQ13740 583 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 APOFQ13790 326 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 CCDC33Q8N5R6 958 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 SLC44A1Q8WWI5 657 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 PRPF18Q99633 342 aaKnown RBP25.31■■□□□ 1.64
SOX1-201ENST00000330949 TMOD2Q9NZR1 351 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 HBS1LQ9Y450 684 aaKnown RBP25.31■■□□□ 1.64
SOX1-201ENST00000330949 TISP43B9A030 160 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 BOLA2-SMG1P6H3BVE0 249 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 CBFA2T3O75081 653 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 SRGAP2CP0DJJ0 459 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 SRGAP2BP0DMP2 458 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 GPC3P51654 580 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms