RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TRIM49D1C9J1S8 452 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 RIPK2O43353 540 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 TTC4O95801 387 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 HMGCRP04035 888 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 SMIM10L2AP0DMW4 78 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 SMIM10L2BP0DMW5 78 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 ESRRAP11474 423 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 PMLP29590 882 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 CCNG2Q16589 344 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 SV2CQ496J9 727 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 BOLA3Q53S33 107 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 SDHAF4Q5VUM1 108 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 TTC27Q6P3X3 843 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 DEFB128Q7Z7B8 93 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 CAVIN3Q969G5 261 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 KATNAL1Q9BW62 490 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 EIF2AQ9BY44 585 aaKnown RBP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 MYH3P11055 1940 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 PPFIA2O75334 1257 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 GARSP41250 739 aaKnown RBP11.46□□□□□ -0.58
TOP3A-201ENST00000321105 CCL14Q16627 93 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 PPP1R26Q5T8A7 1209 aaPredicted RBP11.46□□□□□ -0.58
TOP3A-201ENST00000321105 DEFB106AQ8N104 65 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 HDAC11Q96DB2 347 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 VTA1Q9NP79 307 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 HMGXB4Q9UGU5 601 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.58
TOP3A-201ENST00000321105 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
TOP3A-201ENST00000321105 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 AVILO75366 819 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CD48P09326 243 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MCF2P10911 925 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 IRF1P10914 325 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 RBL1P28749 1068 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 PSEN2P49810 448 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 KDSRQ06136 332 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ASPHQ12797 758 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MTHFD1LQ6UB35 978 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 BZW1Q7L1Q6 419 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CDKL3Q8IVW4 592 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 PPFIBP2Q8ND30 876 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ARMC2Q8NEN0 867 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ERP27Q96DN0 273 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ZNF512Q96ME7 567 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TRIM55Q9BYV6 548 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MYH8P13535 1937 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 PTPRJQ12913 1337 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 HCRTO43612 131 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 GPC4O75487 556 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 USP17L7P0C7H9 530 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 BDNFP23560 247 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CASP2P42575 452 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CLNS1AP54105 237 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TFAP2DQ7Z6R9 452 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MRPL45Q9BRJ2 306 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TSPAN3O60637 253 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 FAM107AO95990 144 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 JCHAINP01591 159 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ELK3P41970 407 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MAGEA9P43362 315 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 NOVP48745 357 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 RASSF2P50749 326 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ATXN3P54252 364 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 SNCBQ16143 134 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 SPATA21Q7Z572 469 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 USP6NLQ92738 828 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 KAT2BQ92831 832 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 EPAS1Q99814 870 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ASB7Q9H672 318 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 NEMP1O14524 444 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 DDX3YO15523 660 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ATP4AP20648 1035 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 DNAJB2P25686 324 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 SOX11P35716 441 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 ARL2P36404 184 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CENPCQ03188 943 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 FOXD4Q12950 439 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
TOP3A-201ENST00000321105 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 NOCTQ9UK39 431 aaKnown RBP11.45□□□□□ -0.58
TOP3A-201ENST00000321105 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms