RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 LRRC6Q86X45 466 aa21.68■■□□□ 1.06
CPNE7-202ENST00000319518 ENDOVQ8N8Q3 282 aaKnown RBP21.68■■□□□ 1.06
CPNE7-202ENST00000319518 NLRP4Q96MN2 994 aa21.68■■□□□ 1.06
CPNE7-202ENST00000319518 NUDCD1Q96RS6 583 aa21.68■■□□□ 1.06
CPNE7-202ENST00000319518 LNPEPQ9UIQ6 1025 aa21.68■■□□□ 1.06
CPNE7-202ENST00000319518 POLIQ9UNA4 740 aa21.68■■□□□ 1.06
CPNE7-202ENST00000319518 LGR5O75473 907 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 SMNDC1O75940 238 aaKnown RBP eCLIP21.67■■□□□ 1.069e-7■■■□□ 14.7
CPNE7-202ENST00000319518 PTPN4P29074 926 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 RAP1GAPP47736 663 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 CLCN3P51790 818 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 TAF11Q15544 211 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 SGSM1Q2NKQ1 1148 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 RFWD3Q6PCD5 774 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 ZNF398Q8TD17 642 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 RSAD2Q8WXG1 361 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 SERAC1Q96JX3 654 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 CPXM1Q96SM3 734 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 PPP1R16BQ96T49 567 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 KCNK13Q9HB14 408 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 LRRC42Q9Y546 428 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 NDC80O14777 642 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 TM9SF1O15321 606 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 B4GALT5O43286 388 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 TOM1L1O75674 476 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 AP3M2P53677 418 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 RAD23BP54727 409 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 OSTNP61366 133 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 IGBP1P78318 339 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 GRM1Q13255 1194 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 ORC1Q13415 861 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 KLHL38Q2WGJ6 581 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 SH2D5Q6ZV89 423 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 ZC3H15Q8WU90 426 aaKnown RBP21.67■■□□□ 1.06
CPNE7-202ENST00000319518 NAF1Q96HR8 494 aaKnown RBP21.67■■□□□ 1.06
CPNE7-202ENST00000319518 VPS11Q9H270 941 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 MANSC1Q9H8J5 431 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 PCSK1NQ9UHG2 260 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 XPO7Q9UIA9 1087 aaKnown RBP21.67■■□□□ 1.06
CPNE7-202ENST00000319518 CPSF3Q9UKF6 684 aaKnown RBP21.67■■□□□ 1.06
CPNE7-202ENST00000319518 CHMP2BQ9UQN3 213 aa21.67■■□□□ 1.06
CPNE7-202ENST00000319518 CSDE1O75534 798 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 ETV4P43268 484 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 TFAMQ00059 246 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 DUOXA2Q1HG44 320 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 FYB2Q5VWT5 728 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 IER5Q5VY09 327 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 SLC10A4Q96EP9 437 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 FAM167AQ96KS9 214 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 MPHOSPH6Q99547 160 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 ACO2Q99798 780 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 FAM167BQ9BTA0 163 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 SAR1AQ9NR31 198 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 ARL8BQ9NVJ2 186 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 H0Y3Z8 333 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 PRKCBP05771 671 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 DHRS4L1P0CG22 281 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 SNAPC2Q13487 334 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 ZNF699Q32M78 642 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 SYCP2LQ5T4T6 812 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 PALM2Q8IXS6 379 aa21.66■■□□□ 1.06
CPNE7-202ENST00000319518 CADM1Q9BY67 442 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 METTL5Q9NRN9 209 aaKnown RBP21.66■■□□□ 1.06
CPNE7-202ENST00000319518 MGAMO43451 1857 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 A0A0G2JND7 137 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 EIF4E1BA6NMX2 242 aaKnown RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 ERBB2P04626 1255 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 KRT7P08729 469 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 PSMC1P62191 440 aaKnown RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 BLMHQ13867 455 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 LDLRAD1Q5T700 205 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 MAP1SQ66K74 1059 aaPredicted RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 ARMCX2Q7L311 632 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 XYLT1Q86Y38 959 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 CEP120Q8N960 986 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 TTC13Q8NBP0 860 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 FNIP1Q8TF40 1166 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 PTCD3Q96EY7 689 aaKnown RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 MRPL4Q9BYD3 311 aaKnown RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 MROH8Q9H579 483 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 STRIP2Q9ULQ0 834 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 TCRBV9S1A1TA0A576 114 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 ELK3P41970 407 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 RASSF2P50749 326 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 NEK3P51956 506 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 BASP1P80723 227 aaKnown RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 WASHC2DQ5SRD0 308 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 NPNTQ6UXI9 565 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 TRIM6Q9C030 488 aaPredicted RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 MINDY3Q9H8M7 445 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 FBXO6Q9NRD1 293 aaPredicted RBP21.65■■□□□ 1.06
CPNE7-202ENST00000319518 CLEC11AQ9Y240 323 aa21.65■■□□□ 1.06
CPNE7-202ENST00000319518 CENPFP49454 3210 aa21.64■■□□□ 1.06
CPNE7-202ENST00000319518 OGTO15294 1046 aa21.64■■□□□ 1.05
CPNE7-202ENST00000319518 TROVE2P10155 538 aaKnown RBP eCLIP21.64■■□□□ 1.05
CPNE7-202ENST00000319518 CD19P15391 556 aa21.64■■□□□ 1.05
CPNE7-202ENST00000319518 CDH8P55286 799 aa21.64■■□□□ 1.05
CPNE7-202ENST00000319518 EIF3EP60228 445 aaKnown RBP21.64■■□□□ 1.05
CPNE7-202ENST00000319518 TRPC3Q13507 836 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms