RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PSTPIP1O43586 416 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 BEST1O76090 585 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 NDUFV1P49821 464 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 CDH6P55285 790 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 MYCBPAPQ8TBZ2 947 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 SLC35F5Q8WV83 523 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 YME1L1Q96TA2 773 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 GPATCH2LQ9NWQ4 482 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 ZSCAN5CA6NGD5 496 aaPredicted RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 PARNO95453 639 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 USP17L7P0C7H9 530 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SULT1E1P49888 294 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 MAPRE1Q15691 268 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 DCP1BQ8IZD4 617 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SUSD3Q96L08 255 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SEPT5Q99719 369 aaPredicted RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 CNPY3Q9BT09 278 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 XPO1O14980 1071 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TTI1O43156 1089 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 B4GALT3O60512 393 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 IFNB1P01574 187 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 MIPP30301 263 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 DR1Q01658 176 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TAF12Q16514 161 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 MGAT5BQ3V5L5 792 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 EFHC1Q5JVL4 640 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SH3PXD2AQ5TCZ1 1133 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 MMGT1Q8N4V1 131 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TMEM199Q8N511 208 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 PFKMP08237 780 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 NCAM1P13591 858 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SLC11A1P49279 550 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 LRRC43Q8N309 656 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ADAM32Q8TC27 787 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 EDEM1Q92611 657 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TMEM169Q96HH4 297 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 TOX2Q96NM4 488 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ACBD6Q9BR61 282 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF148Q9UQR1 794 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 NR2E1Q9Y466 385 aa11.66□□□□□ -0.54
TRIM59-201ENST00000309784 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.545e-6■■■■□ 20.1
TRIM59-201ENST00000309784 TCRBV7S2A1N4TA0A589 114 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 AMHP03971 560 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 DNAJB2P25686 324 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 DEFB106AQ8N104 65 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 TAB3Q8N5C8 712 aaPredicted RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 MCRS1Q96EZ8 462 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 TRIM51Q9BSJ1 452 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 CES2O00748 559 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 LRCH4O75427 683 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 TUBBP07437 444 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 CYP2F1P24903 491 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 PEX5P50542 639 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 BRD3Q15059 726 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 KIAA0319Q5VV43 1072 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 TXNRD3NBQ6F5E7 133 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 CNKSR3Q6P9H4 555 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 MFSD7Q6UXD7 560 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 FAM131BQ86XD5 332 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 MAP7D3Q8IWC1 876 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 OR10T2Q8NGX3 314 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 SLC7A14Q8TBB6 771 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 DMAP1Q9NPF5 467 aaPredicted RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 DDX56Q9NY93 547 aaKnown RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 GABRDO14764 452 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 RCOR2Q8IZ40 523 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 NFU1Q9UMS0 254 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
TRIM59-201ENST00000309784 MAGED2Q9UNF1 606 aaPredicted RBP11.65□□□□□ -0.54
TRIM59-201ENST00000309784 CEP290O15078 2479 aa11.65□□□□□ -0.55
TRIM59-201ENST00000309784 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms