RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PEBP4Q96S96 227 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 TRPV6Q9H1D0 765 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 CASTOR2A6NHX0 329 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 H0YGN5 161 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 KRT14P02533 472 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 SKIP12755 728 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 LCP1P13796 627 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 IVDP26440 423 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 VEGFBP49765 207 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 BYSLQ13895 437 aaKnown RBP22.29■■□□□ 1.16
ATG4D-201ENST00000309469 TRIP13Q15645 432 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-201ENST00000309469 UPP1Q16831 310 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 DSTYKQ6XUX3 929 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 FUKQ8N0W3 1084 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 SLAIN1Q8ND83 568 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 C3orf58Q8NDZ4 430 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 HSPH1Q92598 858 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 SNF8Q96H20 258 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 DUSP16Q9BY84 665 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 FAM204AQ9H8W3 233 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 UBN1Q9NPG3 1134 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 DDX43Q9NXZ2 648 aaKnown RBP22.29■■□□□ 1.16
ATG4D-201ENST00000309469 DNPEPQ9ULA0 475 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 NFS1Q9Y697 457 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 CENPFP49454 3210 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 XPO1O14980 1071 aaKnown RBP22.28■■□□□ 1.16
ATG4D-201ENST00000309469 CKBP12277 381 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
ATG4D-201ENST00000309469 SDC4P31431 198 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 SCNN1AP37088 669 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 LHX1P48742 406 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 CDO1Q16878 200 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 RAB6CQ53S08 254 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 ZNF365Q70YC5 407 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 ARL8AQ96BM9 186 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 RAB6CQ9H0N0 254 aa22.28■■□□□ 1.16
ATG4D-201ENST00000309469 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.28■■□□□ 1.16
ATG4D-201ENST00000309469 DRG1Q9Y295 367 aaKnown RBP22.28■■□□□ 1.16
ATG4D-201ENST00000309469 PRPSAP2O60256 369 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 POMCP01189 267 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CD48P09326 243 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ATF2P15336 505 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ADCY8P40145 1251 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ATP11AP98196 1134 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CCDC142Q17RM4 750 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 KIAA0319Q5VV43 1072 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 PAQR9Q6ZVX9 377 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CYP4V2Q6ZWL3 525 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-201ENST00000309469 SLC26A9Q7LBE3 791 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 GSTA5Q7RTV2 222 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CCDC89Q8N998 374 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 SLC43A3Q8NBI5 491 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CLEC4CQ8WTT0 213 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 PAAF1Q9BRP4 392 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 PSD3Q9NYI0 1048 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 A0A1W2PQ45 241 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-201ENST00000309469 A0A1W2PQY0 241 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 GOLGA6CA6NDK9 693 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 TP73O15350 636 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 FKTNO75072 461 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 GOLGA6DP0CG33 693 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 PMS2P54278 862 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 SLC8A3P57103 927 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ARHGEF6Q15052 776 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 BBS12Q6ZW61 710 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ARCQ7LC44 396 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ECHDC2Q86YB7 292 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 NKD2Q969F2 451 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-201ENST00000309469 HAUS1Q96CS2 278 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 GOLGA6AQ9NYA3 693 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 ZNF148Q9UQR1 794 aa22.27■■□□□ 1.16
ATG4D-201ENST00000309469 CLDN5O00501 218 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 CST8O60676 142 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 DESP17661 470 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 KLRC2P26717 231 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 TTMPQ5BVD1 217 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 MDH1BQ5I0G3 518 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 TRAF7Q6Q0C0 670 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 PIGZQ86VD9 579 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 FAM172AQ8WUF8 416 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 NCAPGQ9BPX3 1015 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 NGRNQ9NPE2 291 aaKnown RBP22.26■■□□□ 1.15
ATG4D-201ENST00000309469 STARD7Q9NQZ5 370 aa22.26■■□□□ 1.15
ATG4D-201ENST00000309469 TIMM13Q9Y5L4 95 aaPredicted RBP22.26■■□□□ 1.15
ATG4D-201ENST00000309469 ENDOD1O94919 500 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 NPR3P17342 541 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 GRK4P32298 578 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 VCPP55072 806 aaKnown RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 DYNLT1P63172 113 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 CAV1Q03135 178 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 GRIK3Q13003 919 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 TIGD5Q53EQ6 642 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 BOLA3Q53S33 107 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 CEP85LQ5SZL2 805 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 RHBDF2Q6PJF5 856 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 ZNF598Q86UK7 904 aaKnown RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 TTC13Q8NBP0 860 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 OR2W6PQ8NHA6 318 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 ZNF296Q8WUU4 475 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 SYT15Q9BQS2 421 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms