RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ARHGAP18Q8N392 663 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 TMEM35BQ8NCS4 154 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 ACSF2Q96CM8 615 aaPredicted RBP18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 PHF7Q9BWX1 381 aaPredicted RBP18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 LRRC4Q9HBW1 653 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 FBXO21O94952 628 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 GYPCP04921 128 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 PRKCIP41743 596 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 GPD2P43304 727 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 GPR15P49685 360 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 KIF11P52732 1056 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 RAB41Q5JT25 222 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 SIX6OS1Q8N1H7 587 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 MRPS31Q92665 395 aaKnown RBP18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 SECISBP2LQ93073 1101 aaKnown RBP18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 LRRC3Q9BY71 257 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 CNGB3Q9NQW8 809 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 TMEM30AQ9NV96 361 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 TRPM5Q9NZQ8 1165 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 NOCTQ9UK39 431 aaKnown RBP18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 MAGED2Q9UNF1 606 aaPredicted RBP18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 SCML2Q9UQR0 700 aa18.88■□□□□ 0.61
SSSCA1-201ENST00000309328 SPTBN5Q9NRC6 3674 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 HHLA1C9JL84 531 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 BEST1O76090 585 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 MYL4P12829 197 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 GABRR2P28476 465 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 CDC25BP30305 580 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 CDH5P33151 784 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 RPL34P49207 117 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 TFF2Q03403 129 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 PRSS36Q5K4E3 855 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 SDHAF4Q5VUM1 108 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 CCDC186Q7Z3E2 898 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 NOP9Q86U38 636 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 VPS36Q86VN1 386 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 PLCD3Q8N3E9 789 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 STKLD1Q8NE28 680 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 GPR152Q8TDT2 470 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 DDX1Q92499 740 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 FBXO32Q969P5 355 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 ASB2Q96Q27 587 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 CDK5RAP1Q96SZ6 601 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 TRIM62Q9BVG3 475 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 POMKQ9H5K3 350 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 ZNHIT6Q9NWK9 470 aaKnown RBP18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 HCFC1R1Q9NWW0 138 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 USP3Q9Y6I4 520 aa18.87■□□□□ 0.61
SSSCA1-201ENST00000309328 GOLGA6L6A8MZA4 724 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 HNRNPH3P31942 346 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 CASP14P31944 242 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 TUBP50607 506 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 CDR1P51861 262 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 ARID5AQ03989 594 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 ARID5BQ14865 1188 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 PTPN21Q16825 1174 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 SNX30Q5VWJ9 437 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 MON1AQ86VX9 555 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 OR8K1Q8NGG5 319 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 UBA3Q8TBC4 463 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 IPO4Q8TEX9 1081 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 IRGQQ8WZA9 623 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 ACP6Q9NPH0 428 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 TLR8Q9NR97 1041 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 CDH7Q9ULB5 785 aa18.86■□□□□ 0.61
SSSCA1-201ENST00000309328 F11P03951 625 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 WEE1P30291 646 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 TKTL1P51854 596 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 KLHL30Q0D2K2 578 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 TAF10Q12962 218 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 PDCLQ13371 301 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 MTMR3Q13615 1198 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 DENND1BQ6P3S1 775 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 GET4Q7L5D6 327 aaPredicted RBP18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 TMC6Q7Z403 805 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 ZDHHC17Q8IUH5 632 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 HS6ST3Q8IZP7 471 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 TDRD5Q8NAT2 981 aaKnown RBP18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 DNAJC7Q99615 494 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 SLC4A5Q9BY07 1137 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 IL21Q9HBE4 155 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 ZNF334Q9HCZ1 680 aaPredicted RBP18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 PRDM6Q9NQX0 595 aa18.85■□□□□ 0.61
SSSCA1-201ENST00000309328 PTPRDP23468 1912 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 A0A1W2PRU2 124 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 AP5Z1O43299 807 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 ZBED1O96006 694 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 SERPING1P05155 500 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 USP46P62068 366 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 PM20D1Q6GTS8 502 aa18.84■□□□□ 0.61
SSSCA1-201ENST00000309328 PMF1Q6P1K2 205 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms