RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 PI4K2BG5E9Z4 385 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 HCRTO43612 131 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 LIASO43766 372 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 ODC1P11926 461 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 COL6A1P12109 1028 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 NPR3P17342 541 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 ITIH2P19823 946 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 RPL21P46778 160 aaKnown RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 CDK7P50613 346 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 AFF1P51825 1210 aaKnown RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 FAM189BP81408 668 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 CALCOCO2Q13137 446 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 CCDC14Q49A88 953 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 EFHC1Q5JVL4 640 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 TRNP1Q6NT89 227 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 BBOF1Q8ND07 529 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 NKD2Q969F2 451 aaPredicted RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 PIWIL1Q96J94 861 aaKnown RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLP1-201ENST00000302731 TRPV6Q9H1D0 765 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
CLP1-201ENST00000302731 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
CLP1-201ENST00000302731 GOLGA8KD6RF30 607 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 M0QZQ0 153 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 DNM1LO00429 736 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 NDC80O14777 642 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 MDM4O15151 490 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 KRT10P13645 584 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 TKTP29401 623 aaKnown RBP11.1□□□□□ -0.63
CLP1-201ENST00000302731 HSD17B3P37058 310 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 PLTPP55058 493 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 SNX1Q13596 522 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
CLP1-201ENST00000302731 SLMAPQ14BN4 828 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 PDK2Q15119 407 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 LLGL1Q15334 1064 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 KAZNQ674X7 775 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 PAQR9Q6ZVX9 377 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 C3orf58Q8NDZ4 430 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 FBXO25Q8TCJ0 367 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 PIK3R5Q8WYR1 880 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 CENPIQ92674 756 aaPredicted RBP11.1□□□□□ -0.63
CLP1-201ENST00000302731 SNF8Q96H20 258 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 ZIM3Q96PE6 472 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 ZWILCHQ9H900 591 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
CLP1-201ENST00000302731 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 RNF40O75150 1001 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 B3GAT3O94766 335 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 FBXO21O94952 628 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ITGAVP06756 1048 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 IVDP26440 423 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ARSEP51690 589 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 VCPP55072 806 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 DHX9Q08211 1270 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 ADCY2Q08462 1091 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 BFSP2Q13515 415 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 SMTNL2Q2TAL5 461 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 GLB1LQ6UWU2 654 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CYP4V2Q6ZWL3 525 aaPredicted RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 ZNF365Q70YC5 407 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 STRADAQ7RTN6 431 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 METTL23Q86XA0 190 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 SLC35B2Q8TB61 432 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CCDC114Q96M63 670 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 DDX23Q9BUQ8 820 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 B3GNT5Q9BYG0 378 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 FOXP3Q9BZS1 431 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 KANSL3Q9P2N6 904 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ASIC3Q9UHC3 531 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 PCSK1NQ9UHG2 260 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 APOC4-APOC2K7ER74 178 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 PIK3R2O00459 728 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ATP2C2O75185 946 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 POMCP01189 267 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 APOC2P02655 101 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ATF2P15336 505 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 SELPP16109 830 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 TYMPP19971 482 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms