RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 LAMA1P25391 3075 aa11.96□□□□□ -0.5
CLCC1-201ENST00000302500 H0Y858 1186 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 GABBR2O75899 941 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 CTHP32929 405 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 FMO5P49326 533 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 SLC5A3P53794 718 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 ANGPT1Q15389 498 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 PKDCCQ504Y2 493 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 ARHGAP15Q53QZ3 475 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 NAIF1Q69YI7 327 aaPredicted RBP11.95□□□□□ -0.5
CLCC1-201ENST00000302500 RBM43Q6ZSC3 357 aaKnown RBP11.95□□□□□ -0.5
CLCC1-201ENST00000302500 KIAA1958Q8N8K9 716 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 FAM200AQ8TCP9 573 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 OVCA2Q8WZ82 227 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 SMARCD1Q96GM5 515 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 CCDC34Q96HJ3 373 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 SHDQ96IW2 340 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 CHRDQ9H2X0 955 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 MFSD1Q9H3U5 465 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 KIF9Q9HAQ2 790 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 PNPLA8Q9NP80 782 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.95□□□□□ -0.52e-12■■■■■ 97.8
CLCC1-201ENST00000302500 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 CISHQ9NSE2 258 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 C2orf42Q9NWW7 574 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 MAGED2Q9UNF1 606 aaPredicted RBP11.95□□□□□ -0.5
CLCC1-201ENST00000302500 USP3Q9Y6I4 520 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 PIAS3Q9Y6X2 628 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 ATG2BQ96BY7 2078 aa11.95□□□□□ -0.5
CLCC1-201ENST00000302500 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 BIN1O00499 593 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 PSMA7O14818 248 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 ZNF263O14978 683 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 EPB41P11171 864 aaKnown RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 KRT13P13646 458 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 GRIK1P39086 918 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 PPP1R2P41236 205 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 ZNF132P52740 706 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 TAF10Q12962 218 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 EML3Q32P44 896 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 PPP1R26Q5T8A7 1209 aaPredicted RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 TRIM68Q6AZZ1 485 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 ARL14EPQ8N8R7 260 aaPredicted RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 MRPS31Q92665 395 aaKnown RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 WBP2Q969T9 261 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 P2RY11Q96G91 374 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 SLITRK6Q9H5Y7 841 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 FBRSL1Q9HCM7 1045 aaKnown RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 DMAP1Q9NPF5 467 aaPredicted RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 FAM86C1Q9NVL1 165 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
CLCC1-201ENST00000302500 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
CLCC1-201ENST00000302500 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 P4HA1P13674 534 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 ARSAP15289 507 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 HOXC13P31276 330 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 PPP3CCP48454 512 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 TUBP50607 506 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 CUL2Q13617 745 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 ZNF852Q6ZMS4 543 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 TTC30AQ86WT1 665 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 RALGPS2Q86X27 583 aaPredicted RBP11.93□□□□□ -0.5
CLCC1-201ENST00000302500 C1orf210Q8IVY1 113 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 KAT5Q92993 513 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 NELL2Q99435 816 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 NT5C1AQ9BXI3 368 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 MMRN2Q9H8L6 949 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 NMUR1Q9HB89 426 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 CYLDQ9NQC7 956 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 GKN1Q9NS71 199 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 FAM49BQ9NUQ9 324 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 COMMD8Q9NX08 183 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
CLCC1-201ENST00000302500 CTNND2Q9UQB3 1225 aa11.93□□□□□ -0.5
CLCC1-201ENST00000302500 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
CLCC1-201ENST00000302500 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
CLCC1-201ENST00000302500 P4HA2O15460 535 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 COCHO43405 550 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 LILRB5O75023 590 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 AP1G2O75843 785 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 PAPSS2O95340 614 aaPredicted RBP11.92□□□□□ -0.5
CLCC1-201ENST00000302500 SP9P0CG40 484 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 MAGEA9P43362 315 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 MRE11P49959 708 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 KIF11P52732 1056 aa11.92□□□□□ -0.5
CLCC1-201ENST00000302500 MESP2Q0VG99 397 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms