RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ALS2CLQ60I27 953 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 CMASQ8NFW8 434 aaPredicted RBP23.38■■□□□ 1.33
SMAD1-201ENST00000302085 GOLGA6BA6NDN3 693 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 BEST1O76090 585 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 ACADSBP45954 432 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 TAZQ16635 292 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 CYP4V2Q6ZWL3 525 aaPredicted RBP23.38■■□□□ 1.33
SMAD1-201ENST00000302085 SLC24A5Q71RS6 500 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 PIK3R5Q8WYR1 880 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 SYT15Q9BQS2 421 aa23.38■■□□□ 1.33
SMAD1-201ENST00000302085 B3GAT3O94766 335 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 BRCC3P46736 316 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 FAM193AP78312 1265 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 PPP1R7Q15435 360 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 PIGZQ86VD9 579 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 IQCKQ8N0W5 287 aa23.37■■□□□ 1.33
SMAD1-201ENST00000302085 MYBPHLA2RUH7 354 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 POLR3GO15318 223 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 EOMESO95936 686 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 SCNN1AP37088 669 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 PLTPP55058 493 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 ATP11AP98196 1134 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 KRT17Q04695 432 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 PAN2Q504Q3 1202 aaKnown RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 SLC26A9Q7LBE3 791 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 FEZ2Q9UHY8 353 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 NEU2Q9Y3R4 380 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 CAPN15O75808 1086 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 MYCP01106 439 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 CD48P09326 243 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 SELPP16109 830 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 NPR3P17342 541 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 PLCB3Q01970 1234 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 CDO1Q16878 200 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 SYDE1Q6ZW31 735 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 LRRC8DQ7L1W4 858 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 KCTD6Q8NC69 237 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 GRK7Q8WTQ7 553 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 RIN2Q8WYP3 895 aaPredicted RBP23.36■■□□□ 1.33
SMAD1-201ENST00000302085 RTP3Q9BQQ7 232 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 MED10Q9BTT4 135 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 MED4Q9NPJ6 270 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 CDH9Q9ULB4 789 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 EFR3BQ9Y2G0 817 aa23.36■■□□□ 1.33
SMAD1-201ENST00000302085 TDRD15B5MCY1 1934 aaKnown RBP23.35■■□□□ 1.33
SMAD1-201ENST00000302085 DNM1LO00429 736 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 LIASO43766 372 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 SDC4P31431 198 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 PTK6Q13882 451 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 GPNMBQ14956 572 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 CLEC20AQ6ZU45 233 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 FAM126BQ8IXS8 530 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 FBXO25Q8TCJ0 367 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 HSPH1Q92598 858 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 UROC1Q96N76 676 aa23.35■■□□□ 1.33
SMAD1-201ENST00000302085 HSF2BPO75031 334 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 TFE3P19532 575 aaPredicted RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 HSP90B2PQ58FF3 399 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 CLLU1OSQ5K130 101 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 CFAP58Q5T655 872 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 DCLRE1AQ6PJP8 1040 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 ARCQ7LC44 396 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 HASPINQ8TF76 798 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 FAM172AQ8WUF8 416 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 LRRC45Q96CN5 670 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 CCDC114Q96M63 670 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 ZIM3Q96PE6 472 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 FMO2Q99518 471 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 PAK6Q9NQU5 681 aaPredicted RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 M0QZQ0 153 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 ENDOD1O94919 500 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 CYP11A1P05108 521 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 ODC1P11926 461 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 IVDP26440 423 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 GBP1P32455 592 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 SLC8A3P57103 927 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 MTFR1Q15390 333 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 UAP1Q16222 522 aaPredicted RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 DRICH1Q6PGQ1 229 aaPredicted RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 GLB1LQ6UWU2 654 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 TMC3Q7Z5M5 1100 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 FAM71BQ8TC56 605 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 KCTD13Q8WZ19 329 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 NDRG1Q92597 394 aaKnown RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 ART4Q93070 314 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 C11orf84Q9BUA3 381 aaPredicted RBP23.34■■□□□ 1.33
SMAD1-201ENST00000302085 SEZ6LQ9BYH1 1024 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 TXLNGYQ9BZA5 131 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 DNPEPQ9ULA0 475 aa23.34■■□□□ 1.33
SMAD1-201ENST00000302085 F8W810 466 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 PRPSAP2O60256 369 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 B4GALT3O60512 393 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 NBNO60934 754 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 ITGB1P05556 798 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 HSD17B3P37058 310 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 PTPN9P43378 593 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 ARSEP51690 589 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 ADCY1Q08828 1119 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 TRIP13Q15645 432 aaPredicted RBP23.33■■□□□ 1.33
SMAD1-201ENST00000302085 ZNF280BQ86YH2 543 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms