RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TAS2R14Q9NYV8 317 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 STAG3L1P0CL83 205 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 TSPAN8P19075 237 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 DSG1Q02413 1049 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 MAP10Q9P2G4 905 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 DTNAQ9Y4J8 743 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 F8W8V4 182 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 NQO1P15559 274 aaKnown RBP15.99■□□□□ 0.15
FNDC1-201ENST00000297267 ZNF23P17027 643 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
FNDC1-201ENST00000297267 HDAC4P56524 1084 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 SV2CQ496J9 727 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 C16orf46Q6P387 395 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 SCUBE3Q8IX30 993 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 SEMA4AQ9H3S1 761 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 CDH16O75309 829 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 FAM200BP0CF97 657 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 DET1Q7L5Y6 550 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 SLC5A5Q92911 643 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 GLMNQ92990 594 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 ECSITQ9BQ95 431 aa15.99■□□□□ 0.15
FNDC1-201ENST00000297267 TRDMT1O14717 391 aaKnown RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 RPA1P27694 616 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 SCFD1Q8WVM8 642 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 STAMBPL1Q96FJ0 436 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 OVOS2A0A0G2JMS6 1433 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 RNF103O00237 685 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 NBNO60934 754 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 CYBBP04839 570 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 ST3GAL1Q11201 340 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 NBPF12Q5TAG4 269 aaPredicted RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 MTHFD1LQ6UB35 978 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 RPRD1AQ96P16 312 aaPredicted RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 SETD4Q9NVD3 440 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 SMG5Q9UPR3 1016 aaKnown RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 SASH3O75995 380 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 SHBGP04278 402 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 IFNA8P32881 189 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 DGKDQ16760 1214 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 NLRP9Q7RTR0 991 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 PCDHB2Q9Y5E7 798 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 LRRIQ1Q96JM4 1722 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 STAU1O95793 577 aaKnown RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 IL1RAPL1Q9NZN1 696 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 PAK5Q9P286 719 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 PPRC1Q5VV67 1664 aaKnown RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 A0A087WZ62 844 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 PDPK2PQ6A1A2 396 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 FDXACB1Q9BRP7 624 aaPredicted RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 GIMAP4Q9NUV9 329 aa15.98■□□□□ 0.15
FNDC1-201ENST00000297267 DMGDHQ9UI17 866 aaKnown RBP15.98■□□□□ 0.15
FNDC1-201ENST00000297267 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 PKN1Q16512 942 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 TTC33Q6PID6 262 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 B3GALNT2Q8NCR0 500 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 IKZF4Q9H2S9 585 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ZNF556Q9HAH1 456 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 IL17RBQ9NRM6 502 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 CRLS1Q9UJA2 301 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 FAM32AQ9Y421 112 aaKnown RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 IGSF9BQ9UPX0 1349 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ARHGEF9O43307 516 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SSTR1P30872 391 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 CDH18Q13634 790 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 TPD52L3Q96J77 140 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SYTL2Q9HCH5 934 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 N6AMT1Q9Y5N5 214 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 FOXO6A8MYZ6 492 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 RGL2O15211 777 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 LGR5O75473 907 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 BAIAP3O94812 1187 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SH3BGRP55822 239 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 B3GAT3O94766 335 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 CYP2R1Q6VVX0 501 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 OLFM3Q96PB7 478 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 TEX12Q9BXU0 123 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 EME2A4GXA9 379 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 KBTBD13C9JR72 458 aa15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SPRP35270 261 aaPredicted RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 RPL21P46778 160 aaKnown RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 HARS2P49590 506 aaKnown RBP15.97■□□□□ 0.15
FNDC1-201ENST00000297267 SNAPC2Q13487 334 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms