RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GPR32O75388 356 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 RNF8O76064 485 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 IL4RP24394 825 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 ADORA2BP29275 332 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 GABRB2P47870 512 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 COPS2P61201 443 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 CCNA1P78396 465 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 HADHQ16836 314 aaKnown RBP12.33□□□□□ -0.44
RHO-201ENST00000296271 DUSP28Q4G0W2 176 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 FAM133BQ5BKY9 247 aaKnown RBP12.33□□□□□ -0.44
RHO-201ENST00000296271 POLNQ7Z5Q5 900 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 AGGF1Q8N302 714 aaeCLIP12.33□□□□□ -0.44
RHO-201ENST00000296271 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.44
RHO-201ENST00000296271 RSAD2Q8WXG1 361 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 PCDH9Q9HC56 1237 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 TMPRSS4Q9NRS4 437 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 MFHAS1Q9Y4C4 1052 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 H0YHG0 523 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 CDH16O75309 829 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 HMGCRP04035 888 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 KRT7P08729 469 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SMIM10L2AP0DMW4 78 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SMIM10L2BP0DMW5 78 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 GPD1P21695 349 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 ACTN3Q08043 901 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 INCA1Q0VD86 236 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SOWAHAQ2M3V2 549 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 BBS9Q3SYG4 887 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 OLFML2BQ68BL8 750 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 HAUS2Q9NVX0 235 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 MEIS3P2A8K0S8 358 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 TREHO43280 583 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 RECQL4O94761 1208 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 ATICP31939 592 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 PTPN7P35236 360 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SCTRP47872 440 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 TAZQ16635 292 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 HIF1AQ16665 826 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 PPP6R3Q5H9R7 873 aaPredicted RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 LCLAT1Q6UWP7 414 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 NAT8LQ8N9F0 302 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
RHO-201ENST00000296271 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 SLCO1B3Q9NPD5 702 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 ZSWIM8A7E2V4 1837 aa12.32□□□□□ -0.44
RHO-201ENST00000296271 VGLL3A8MV65 326 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 ALOX15BO15296 676 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 FSBPO95073 299 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 LCP1P13796 627 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 GRM5P41594 1212 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 YARSP54577 528 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 LMNB2Q03252 620 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 GRB14Q14449 540 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 MORF4L2Q15014 288 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 DGKDQ16760 1214 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 BBOF1Q8ND07 529 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 FNIP1Q8TF40 1166 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 FAM172AQ8WUF8 416 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 CYP3A43Q9HB55 503 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 XPO7Q9UIA9 1087 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 C2CD2Q9Y426 696 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 SNX3O60493 162 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 TCEA3O75764 348 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 CPP00450 1065 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 KRT15P19012 456 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 HNRNPH1P31943 449 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 PITX1P78337 314 aaPredicted RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 STAT4Q14765 748 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 SLC1A5Q15758 541 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 YTHDF3Q7Z739 585 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 CTU1Q7Z7A3 348 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 TRABD2AQ86V40 505 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 RELL1Q8IUW5 271 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 PQLC3Q8N755 202 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 CKAP2Q8WWK9 683 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 EMID1Q96A84 441 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms