RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 AZIN2Q96A70 460 aa11.86□□□□□ -0.51
SCLT1-201ENST00000281142 OXNAD1Q96HP4 312 aaPredicted RBP11.86□□□□□ -0.51
SCLT1-201ENST00000281142 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
SCLT1-201ENST00000281142 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
SCLT1-201ENST00000281142 PREBQ9HCU5 417 aa11.86□□□□□ -0.51
SCLT1-201ENST00000281142 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
SCLT1-201ENST00000281142 TBX20Q9UMR3 447 aa11.86□□□□□ -0.51
SCLT1-201ENST00000281142 RNASEH1O60930 286 aaKnown RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 FAM155BO75949 473 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 OSBPP22059 807 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 NOMO3P69849 1222 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 OGDHQ02218 1023 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 MCL1Q07820 350 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CYP24A1Q07973 514 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 OASLQ15646 514 aaKnown RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CCDC62Q6P9F0 684 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 RIPOR1Q6ZS17 1223 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CDHR3Q6ZTQ4 885 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 MMADHCQ9H3L0 296 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 BTBD7Q9P203 1132 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 BLOC1S6Q9UL45 172 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 SLC45A1Q9Y2W3 748 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 MEI4A8MW99 385 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 PMM2O15305 246 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 LPXNO60711 386 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 TMEM63AO94886 807 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 KITP10721 976 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ANPEPP15144 967 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 TPP2P29144 1249 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 PRKD1Q15139 912 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ADGRD1Q6QNK2 874 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ISLR2Q6UXK2 745 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 LBX2Q6XYB7 198 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CPT1BQ92523 772 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 FOXP3Q9BZS1 431 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 C1orf112Q9NSG2 853 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CHMP2BQ9UQN3 213 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 DHX15O43143 795 aaKnown RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 CNMDO75829 334 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ICAM1P05362 532 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 PSMC5P62195 406 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 TMEM270Q6UE05 265 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 RAPH1Q70E73 1250 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 THTPAQ9BU02 230 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 EBF3Q9H4W6 596 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ZNF212Q9UDV6 495 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 RIPK3Q9Y572 518 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 PCDHB2Q9Y5E7 798 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-201ENST00000281142 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
SCLT1-201ENST00000281142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 P4HBP07237 508 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 ETV4P43268 484 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 NPTX2P47972 431 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 VEGFBP49765 207 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 NOGQ13253 232 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 SMTNL2Q2TAL5 461 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 CFAP61Q8NHU2 1237 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 IWS1Q96ST2 819 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 VPS11Q9H270 941 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 DNAJC6O75061 913 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 SORBS2O94875 1100 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 TM4SF4P48230 202 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 CDC16Q13042 620 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 LIN9Q5TKA1 542 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 FAM81BQ96LP2 452 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 FNBP1Q96RU3 617 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 ECSITQ9BQ95 431 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 DHRS4Q9BTZ2 278 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 ATXN10Q9UBB4 475 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 PPARGC1AQ9UBK2 798 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 SLC7A8Q9UHI5 535 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
SCLT1-201ENST00000281142 MTO1Q9Y2Z2 717 aaKnown RBP11.84□□□□□ -0.51
SCLT1-201ENST00000281142 MT-ND3P03897 115 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 C1QTNF8P60827 252 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 GCNT1Q02742 428 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms