RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 WSCD1Q658N2 575 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CYP4V2Q6ZWL3 525 aaPredicted RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SH2D3CQ8N5H7 860 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ALLCQ8N6M5 410 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SLC35B2Q8TB61 432 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 HSPH1Q92598 858 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 LPPQ93052 612 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 PKNOX2Q96KN3 472 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 HSFY1Q96LI6 401 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 HNRNPABQ99729 332 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 B3GNT5Q9BYG0 378 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 FRMD8P1Q9BZ68 369 aaPredicted RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ATP2C2O75185 946 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CAPN15O75808 1086 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ITGAVP06756 1048 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CAPN2P17655 700 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CD52P31358 61 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SCNN1AP37088 669 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ACADSBP45954 432 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 VPS41P49754 854 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 OTUD4Q01804 1114 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 IFFO1Q0D2I5 559 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 PTK7Q13308 1070 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 FAM26DQ5JW98 314 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 MAP3K21Q5TCX8 1036 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 DENND2CQ68D51 928 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 PRUNE1Q86TP1 453 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 HAUS1Q96CS2 278 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SENP8Q96LD8 212 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CFAP57Q96MR6 1250 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 NCAPGQ9BPX3 1015 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 RSAD1Q9HA92 442 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 DDX20Q9UHI6 824 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
TRIM55-201ENST00000276573 RIPK2O43353 540 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 PRPSAP2O60256 369 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 MGEA5O60502 916 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CABYRO75952 493 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 SHBGP04278 402 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 GHRP10912 638 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 LCP1P13796 627 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 ETS1P14921 441 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 SDC4P31431 198 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 RPL9P32969 192 aaKnown RBP10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CHKAP35790 457 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CLCNKBP51801 687 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 DYNLT1P63172 113 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 ATP11AP98196 1134 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 LPIN1Q14693 890 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CDO1Q16878 200 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
TRIM55-201ENST00000276573 KRT71Q3SY84 523 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 IZUMO3Q5VZ72 239 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 KDM7AQ6ZMT4 941 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 TRMT10CQ7L0Y3 403 aaKnown RBP10.04□□□□□ -0.8
TRIM55-201ENST00000276573 SLC26A9Q7LBE3 791 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 ARCQ7LC44 396 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 RNF180Q86T96 592 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 RFX6Q8HWS3 928 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 FUKQ8N0W3 1084 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 GLIS1Q8NBF1 620 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CCHCR1Q8TD31 782 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 TMEM109Q9BVC6 243 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 ADAM7Q9H2U9 754 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CENPHQ9H3R5 247 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 LRRC4CQ9HCJ2 640 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 CACNG4Q9UBN1 327 aa10.04□□□□□ -0.8
TRIM55-201ENST00000276573 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
TRIM55-201ENST00000276573 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 ZSCAN5DPP0CG00 497 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TKTP29401 623 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 PTPN9P43378 593 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 SCNN1GP51170 649 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 ACLYP53396 1101 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CDH6P55285 790 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 PDK2Q15119 407 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 P3H1Q32P28 736 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 UBAP2Q5T6F2 1119 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 PAQR9Q6ZVX9 377 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TMEM86AQ8N2M4 240 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CLEC4CQ8WTT0 213 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 FAM172AQ8WUF8 416 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms