RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 PDGFRAP16234 1089 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 LHX1P48742 406 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 UROC1Q96N76 676 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 SMOQ99835 787 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PQBP1O60828 265 aaKnown RBP12.72□□□□□ -0.37
SDE2-201ENST00000272091 FNTAP49354 379 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 GATMP50440 423 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PPP2R5EQ16537 467 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 SND1Q7KZF4 910 aaKnown RBP eCLIP12.72□□□□□ -0.37
SDE2-201ENST00000272091 OR10T2Q8NGX3 314 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 DNAJB4Q9UDY4 337 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 NEU2Q9Y3R4 380 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 NPR3P17342 541 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 ARSEP51690 589 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 SNX1Q13596 522 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 ACAP1Q15027 740 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 GPRIN1Q7Z2K8 1008 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 FAM35AQ86V20 835 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 SLCO2A1Q92959 643 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 RBM41Q96IZ5 413 aaKnown RBP12.72□□□□□ -0.37
SDE2-201ENST00000272091 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 PLVAPQ9BX97 442 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 KRT82Q9NSB4 513 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SDE2-201ENST00000272091 GRHL1Q9NZI5 618 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
SDE2-201ENST00000272091 HHLA1C9JL84 531 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 H3BQF6 201 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 ODC1P11926 461 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 PCK1P35558 622 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 NDUFV1P49821 464 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 BFSP2Q13515 415 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 NOMO2Q5JPE7 1267 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 SLC26A9Q7LBE3 791 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 EIF1ADQ8N9N8 165 aaKnown RBP12.71□□□□□ -0.37
SDE2-201ENST00000272091 VWCEQ96DN2 955 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 ZDHHC18Q9NUE0 388 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 TP73O15350 636 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.37
SDE2-201ENST00000272091 ATN1P54259 1190 aaPredicted RBP12.71□□□□□ -0.37
SDE2-201ENST00000272091 OTUD1Q5VV17 481 aaPredicted RBP12.71□□□□□ -0.37
SDE2-201ENST00000272091 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 LRRTM3Q86VH5 581 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 KCTD13Q8WZ19 329 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 SCLYQ96I15 445 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 TRIM31Q9BZY9 425 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
SDE2-201ENST00000272091 LRRD1A4D1F6 860 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 KDELR1P24390 212 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 SCNN1AP37088 669 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 RPL21P46778 160 aaKnown RBP12.71□□□□□ -0.38
SDE2-201ENST00000272091 ADIGQ0VDE8 80 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 FAAP100Q0VG06 881 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 CUL1Q13616 776 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 DCLRE1AQ6PJP8 1040 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 GLB1LQ6UWU2 654 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.38
SDE2-201ENST00000272091 DIS3LQ8TF46 1054 aaKnown RBP12.71□□□□□ -0.38
SDE2-201ENST00000272091 KCNK16Q96T55 309 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 TMEM161AQ9NX61 479 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 ENDOD1O94919 500 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 HDAC4P56524 1084 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 MAP3K7CLP57077 242 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 COPS2P61201 443 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 CDO1Q16878 200 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 KAZNQ674X7 775 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 CENPIQ92674 756 aaPredicted RBP12.71□□□□□ -0.38
SDE2-201ENST00000272091 CASD1Q96PB1 797 aa12.71□□□□□ -0.38
SDE2-201ENST00000272091 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 TTC3P53804 2025 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 ATXN1P54253 815 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 ATP11AP98196 1134 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 NNTQ13423 1086 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms