RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 KLC4Q9NSK0 619 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 DPP3Q9NY33 737 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 FAM47DPA6NHR8 397 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 MAGEB2O15479 319 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 TSPAN1O60635 241 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 GRAP2O75791 330 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
CPSF6-201ENST00000266679 KRT15P19012 456 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 GPD1P21695 349 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 FOXN2P32314 431 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 GABRB2P47870 512 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 CDO1Q16878 200 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 MSS51Q4VC12 460 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 FNBP1LQ5T0N5 605 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 PCGF5Q86SE9 256 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
CPSF6-201ENST00000266679 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
CPSF6-201ENST00000266679 C4orf33Q8N1A6 199 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 FAM71DQ8N9W8 422 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 SHCBP1Q8NEM2 672 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 PIWIL1Q96J94 861 aaKnown RBP13.5□□□□□ -0.25
CPSF6-201ENST00000266679 FRMD8P1Q9BZ68 369 aaPredicted RBP13.5□□□□□ -0.25
CPSF6-201ENST00000266679 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 CLUHO75153 1309 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 RALGAPA2Q2PPJ7 1873 aa13.5□□□□□ -0.25
CPSF6-201ENST00000266679 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TCRBV7S3A2A0A539 114 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 VGLL3A8MV65 326 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 E5RJQ4 531 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 SUN1O94901 812 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 HMGCRP04035 888 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ADORA2AP29274 412 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 RGS7P49802 495 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 NRLP54845 237 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ARL4CP56559 192 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 WDR4P57081 412 aaKnown RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 GPX6P59796 221 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 POU5F1BQ06416 359 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 NR1H3Q13133 447 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 C15orf59Q2T9L4 293 aaPredicted RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 GOLGA7BQ2TAP0 167 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TDRPQ86YL5 185 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 PPTC7Q8NI37 304 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 FAXDC2Q96IV6 333 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ASNSD1Q9NWL6 643 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TSPAN16Q9UKR8 245 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 BARX2Q9UMQ3 279 aaPredicted RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 SLC12A4Q9UP95 1085 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 LOC102724159A0A0B4J2E5 919 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 MCF2LO15068 1137 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TMEM63AO94886 807 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 UBOX5O94941 541 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 APOC2P02655 101 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 TAC1P20366 129 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 CDH6P55285 790 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 RBP5P82980 135 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 IL9RQ01113 521 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 PWP2Q15269 919 aaKnown RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ZNF792Q3KQV3 632 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 FAM182AQ5T1J6 154 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 SMYD5Q6GMV2 418 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 C17orf99Q6UX52 265 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 NAT8LQ8N9F0 302 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
CPSF6-201ENST00000266679 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 RXFP2Q8WXD0 754 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 ACAP3Q96P50 834 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 COL1A2P08123 1366 aa13.49□□□□□ -0.25
CPSF6-201ENST00000266679 GSTA1P08263 222 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 SSTR1P30872 391 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 RDXP35241 583 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ZNF143P52747 638 aaPredicted RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 BASP1P80723 227 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 INCA1Q0VD86 236 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 BBS9Q3SYG4 887 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ICE2Q659A1 982 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 CYB5D1Q6P9G0 228 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 FAM47EQ6ZV65 393 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 C12orf29Q8N999 325 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 GPRC5AQ8NFJ5 357 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 PYROXD1Q8WU10 500 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 SMC6Q96SB8 1091 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 WDR83Q9BRX9 315 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 VTA1Q9NP79 307 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 PSMC3IPQ9P2W1 217 aaPredicted RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 SCN1AP35498 2009 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms