RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.08
CDH3-201ENST00000264012 HASPINQ8TF76 798 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 VCPIP1Q96JH7 1222 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.09
CDH3-201ENST00000264012 KPNA6O60684 536 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 PPP3CAQ08209 521 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 ANO5Q75V66 913 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 YAF2Q8IY57 180 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 SHCBP1Q8NEM2 672 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 FBXO32Q969P5 355 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 PORCNQ9H237 461 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 UBIAD1Q9Y5Z9 338 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 TBC1D12O60347 775 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
CDH3-201ENST00000264012 PDHA1P08559 390 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 TTC30BQ8N4P2 665 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 FAM111AQ96PZ2 611 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 C3P01024 1663 aa14.52□□□□□ -0.09
CDH3-201ENST00000264012 CCT8L1PA6NM43 557 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 AKAP5P24588 427 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 IFNA8P32881 189 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 SLC11A2P49281 568 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 DNAL1Q4LDG9 190 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 MFN1Q8IWA4 741 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 GPR63Q9BZJ6 419 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ING2Q9H160 280 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 TMBIM4Q9HC24 238 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 DSEQ9UL01 958 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CASTOR2A6NHX0 329 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 SDR42E2A6NKP2 422 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 STK25O00506 426 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CAND2O75155 1236 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 TKTL1P51854 596 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 GEMP55040 296 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 RIOX2Q8IUF8 465 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CCNJLQ8IV13 435 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 LRRC34Q8IZ02 419 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CENPKQ9BS16 269 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ZNF212Q9UDV6 495 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CDH8P55286 799 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 BTNL9Q6UXG8 535 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 NT5DC3Q86UY8 548 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ZSCAN5CA6NGD5 496 aaPredicted RBP14.51□□□□□ -0.09
CDH3-201ENST00000264012 LACTBL1A8MY62 500 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ZBTB22O15209 634 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 SYF2O95926 243 aaKnown RBP14.51□□□□□ -0.09
CDH3-201ENST00000264012 PYGMP11217 842 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ADCYAP1R1P41586 468 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 ZNF268Q14587 947 aaPredicted RBP14.51□□□□□ -0.09
CDH3-201ENST00000264012 CTXN3Q4LDR2 81 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 PTRHD1Q6GMV3 140 aaKnown RBP14.51□□□□□ -0.09
CDH3-201ENST00000264012 TLK2Q86UE8 772 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 GPRC5DQ9NZD1 345 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 CDY1Q9Y6F8 540 aa14.51□□□□□ -0.09
CDH3-201ENST00000264012 WNT7AO00755 349 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 ASMTLO95671 621 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 ARHGEF7Q14155 803 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 LONP2Q86WA8 852 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 ARID3BQ8IVW6 561 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 LRRN4CLQ8ND94 238 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 CAVIN3Q969G5 261 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 TSC22D3Q99576 134 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 NAT9Q9BTE0 207 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 KLHL2O95198 593 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 ENO3P13929 434 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 DLG4P78352 724 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 KAT5Q92993 513 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 PPP2R3CQ969Q6 453 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 SYT15Q9BQS2 421 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 ASPSCR1Q9BZE9 553 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 DDX43Q9NXZ2 648 aaKnown RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 TIMM13Q9Y5L4 95 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 H7C4K7 107 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 MAP4P27816 1152 aaKnown RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 VCPP55072 806 aaKnown RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 ZNF177Q13360 481 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 NFIL3Q16649 462 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 MIIPQ5JXC2 388 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 IL31RAQ8NI17 732 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 CINPQ9BW66 212 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 AVENQ9NQS1 362 aaPredicted RBP14.5□□□□□ -0.09
CDH3-201ENST00000264012 PCDHGB4Q9UN71 923 aa14.5□□□□□ -0.09
CDH3-201ENST00000264012 TFRCP02786 760 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 RGS4P49798 205 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ABCE1P61221 599 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 GTF2BQ00403 316 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 TATDN1Q6P1N9 297 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ZNF410Q86VK4 478 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ARRDC4Q8NCT1 418 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 BHMTQ93088 406 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 FAM167BQ9BTA0 163 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SEMA4AQ9H3S1 761 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 AAR2Q9Y312 384 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 PCDHA3Q9Y5H8 950 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ASTN1O14525 1302 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SUPT3HB4E1H0 165 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms