RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 POTEHQ6S545 545 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 NOP9Q86U38 636 aaKnown RBP19.37■□□□□ 0.69
SDF4-201ENST00000263741 PIGZQ86VD9 579 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 SHKBP1Q8TBC3 707 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 SLC20A1Q8WUM9 679 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CPLX3Q8WVH0 158 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 RPGRIP1Q96KN7 1286 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 NECTIN4Q96NY8 510 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 KIAA1257Q9ULG3 409 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 ASB3Q9Y575 518 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 LRRC53A6NM62 1247 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 TNFRSF10BO14763 440 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 MOSPD3O75425 235 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 TADA3O75528 432 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CYP11B1P15538 503 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 BST2Q10589 180 aaKnown RBP19.37■□□□□ 0.69
SDF4-201ENST00000263741 PKDCCQ504Y2 493 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 SARM1Q6SZW1 724 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 NECAB3Q96P71 396 aaPredicted RBP19.37■□□□□ 0.69
SDF4-201ENST00000263741 MYADMQ96S97 322 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 STAT1P42224 750 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 EPHA5P54756 1037 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 TEAD2Q15562 447 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 CYP4A22Q5TCH4 519 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 CYP26C1Q6V0L0 522 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 TMEM150AQ86TG1 271 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 NUP93Q8N1F7 819 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 EPS8L1Q8TE68 723 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 PDCL3Q9H2J4 239 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 DYNC1I1O14576 645 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 GYPCP04921 128 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 BMP1P13497 986 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 GBP2P32456 591 aaPredicted RBP19.36■□□□□ 0.69
SDF4-201ENST00000263741 PDE6CP51160 858 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 ATXN3LQ9H3M9 355 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 CYTH4Q9UIA0 394 aa19.36■□□□□ 0.69
SDF4-201ENST00000263741 NCOR1O75376 2440 aa19.35■□□□□ 0.69
SDF4-201ENST00000263741 PUS10Q3MIT2 529 aaKnown RBP19.35■□□□□ 0.69
SDF4-201ENST00000263741 DNTTIP2Q5QJE6 756 aaKnown RBP19.35■□□□□ 0.69
SDF4-201ENST00000263741 NPAS3Q8IXF0 933 aa19.35■□□□□ 0.69
SDF4-201ENST00000263741 FGF13Q92913 245 aa19.35■□□□□ 0.69
SDF4-201ENST00000263741 PHF7Q9BWX1 381 aaPredicted RBP19.35■□□□□ 0.69
SDF4-201ENST00000263741 NOCTQ9UK39 431 aaKnown RBP19.35■□□□□ 0.69
SDF4-201ENST00000263741 C2CD4DB7Z1M9 353 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 XPO1O14980 1071 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 MED7O43513 233 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 PGFP49763 221 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 GOLGA8FQ08AF8 430 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 GOLGA8DPQ0D2H9 430 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 TAF10Q12962 218 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 PMF1Q6P1K2 205 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 MTERF4Q7Z6M4 381 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 VSTM4Q8IW00 320 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 DDX1Q92499 740 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 NDRG1Q92597 394 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 MCRS1Q96EZ8 462 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 TRMT2BQ96GJ1 504 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 MYRFLQ96LU7 910 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 FAM50BQ9Y247 325 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 DAAM1Q9Y4D1 1078 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 GABBR2O75899 941 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 F11P03951 625 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 MMEP08473 750 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 SETSIPP0DME0 302 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 YWHAQP27348 245 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 ADIGQ0VDE8 80 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 STILQ15468 1287 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 C1orf131Q8NDD1 294 aaKnown RBP19.34■□□□□ 0.69
SDF4-201ENST00000263741 FBXO32Q969P5 355 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 ZSWIM3Q96MP5 696 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 TTLL2Q9BWV7 592 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 GMIPQ9P107 970 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 TJP2Q9UDY2 1190 aa19.34■□□□□ 0.69
SDF4-201ENST00000263741 ITIH6Q6UXX5 1313 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 SLC34A2O95436 690 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 KRT9P35527 623 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 GPD2P43304 727 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 SLC8A3P57103 927 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 SPECC1LQ69YQ0 1117 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 SLC35F5Q8WV83 523 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 SLITRK6Q9H5Y7 841 aa19.33■□□□□ 0.69
SDF4-201ENST00000263741 ABL1P00519 1130 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 LCP1P13796 627 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 CHRNB2P17787 502 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 CASP14P31944 242 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 PLA2G4AP47712 749 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 ZNF75DP51815 510 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 ZP2Q05996 745 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 FIGNQ5HY92 759 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 TMC6Q7Z403 805 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 TDRD5Q8NAT2 981 aaKnown RBP19.32■□□□□ 0.68
SDF4-201ENST00000263741 TTC28Q96AY4 2481 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 GCNAQ96QF7 691 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 AVENQ9NQS1 362 aaPredicted RBP19.32■□□□□ 0.68
SDF4-201ENST00000263741 ST7Q9NRC1 585 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 CHORDC1Q9UHD1 332 aaPredicted RBP19.32■□□□□ 0.68
SDF4-201ENST00000263741 MUC3AQ02505 3323 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 TRIOO75962 3097 aa19.32■□□□□ 0.68
SDF4-201ENST00000263741 RTN3O95197 1032 aaPredicted RBP19.32■□□□□ 0.68
SDF4-201ENST00000263741 USP17L7P0C7H9 530 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms