RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 AGO3Q9H9G7 860 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 ANAPC5Q9UJX4 755 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 PIRO00625 290 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 CHUKO15111 745 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 GNAT1P11488 350 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 THPOP40225 353 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 CETN2P41208 172 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 INHBEP58166 350 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 BYSLQ13895 437 aaKnown RBP14.23□□□□□ -0.13
VMP1-201ENST00000262291 E2F5Q15329 346 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 P3H1Q32P28 736 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 SYCP2LQ5T4T6 812 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 IZUMO3Q5VZ72 239 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 NIPA2Q8N8Q9 360 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 SNX25Q9H3E2 840 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 MIOSQ9NXC5 875 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 GTF2IRD1Q9UHL9 959 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 USP18Q9UMW8 372 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 I3L4J1 428 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 PAPSS1O43252 624 aaPredicted RBP14.23□□□□□ -0.13
VMP1-201ENST00000262291 RNF8O76064 485 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 ASGR1P07306 291 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 GPD1P21695 349 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 KDELR1P24390 212 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
VMP1-201ENST00000262291 MAGOHP61326 146 aaKnown RBP14.23□□□□□ -0.13
VMP1-201ENST00000262291 KCNA10Q16322 511 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 LRIG3Q6UXM1 1119 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 PAAF1Q9BRP4 392 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 XPNPEP3Q9NQH7 507 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 KLC4Q9NSK0 619 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.23□□□□□ -0.13
VMP1-201ENST00000262291 RNF186Q9NXI6 227 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 HESX1Q9UBX0 185 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 DERAQ9Y315 318 aa14.23□□□□□ -0.13
VMP1-201ENST00000262291 GOLGA8MH3BSY2 632 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 M0QZ92 97 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 SGK1O00141 431 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 TRUB2O95900 331 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 GHRP10912 638 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 GABRB2P47870 512 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 ARSEP51690 589 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 GDF10P55107 478 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 OTUD4Q01804 1114 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 HADHQ16836 314 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 CCDC38Q502W7 563 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 ZC3H12AQ5D1E8 599 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 CAPN12Q6ZSI9 719 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 LRRC52Q8N7C0 313 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 ACTL9Q8TC94 416 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 RUNDC3BQ96NL0 473 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 CDC42EP4Q9H3Q1 356 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 WDR35Q9P2L0 1181 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 Q9Y3F1 56 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 NEU2Q9Y3R4 380 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 C2CD4BA6NLJ0 364 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 PECAM1P16284 738 aaPredicted RBP14.22□□□□□ -0.13
VMP1-201ENST00000262291 AXLP30530 894 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 GJA9P57773 515 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 LILRA4P59901 499 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 GPS1Q13098 491 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 KYNUQ16719 465 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 CCDC14Q49A88 953 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 LRRC38Q5VT99 294 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 WSCD1Q658N2 575 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 ADGRF2Q8IZF7 708 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 APPL2Q8NEU8 664 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 C9orf72Q96LT7 481 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 ADAM33Q9BZ11 813 aa14.22□□□□□ -0.13
VMP1-201ENST00000262291 RIPK2O43353 540 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 CD52P31358 61 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 TAF6P49848 677 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 CDH6P55285 790 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 IFI35P80217 286 aaPredicted RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 GAD2Q05329 585 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 PREPLQ4J6C6 727 aaPredicted RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 OLFML1Q6UWY5 402 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 HASPINQ8TF76 798 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.131e-8■■□□□ 14.4
VMP1-201ENST00000262291 SLCO2A1Q92959 643 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 TRMT13Q9NUP7 481 aaKnown RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 DDX56Q9NY93 547 aaKnown RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 BANF1O75531 89 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 CD4P01730 458 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 RPSAP08865 295 aaKnown RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 KLRC2P26717 231 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 HOXC8P31273 242 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 TM4SF4P48230 202 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 ZNF143P52747 638 aaPredicted RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 CA9Q16790 459 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 LONRF1Q17RB8 773 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 PKDCCQ504Y2 493 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms