RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SUPT20HL2P0C7V6 817 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 OSBPP22059 807 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 PTPN4P29074 926 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 CCDC15Q0P6D6 951 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ZBTB10Q96DT7 871 aa15.13■□□□□ 0.01
SFSWAP-201ENST00000261674 ZWINTO95229 277 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 MCL1Q07820 350 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 RCN1Q15293 331 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 RELL1Q8IUW5 271 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 COPS5Q92905 334 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 MECRQ9BV79 373 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 DRG1Q9Y295 367 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 INO80B-WBP1J3KQ70 363 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 CXCL11O14625 94 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 MAGEB2O15479 319 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 LRCH4O75427 683 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 OATP04181 439 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 ITGAVP06756 1048 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 KPNB1Q14974 876 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 LY6KQ17RY6 165 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 PARP6Q2NL67 630 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 PRAMEF19Q5SWL8 479 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 FBXO16Q8IX29 292 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 LMNTD2Q8IXW0 634 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 RNF149Q8NC42 400 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 INO80BQ9C086 356 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 PDGFCQ9NRA1 345 aa15.12■□□□□ 0.01
SFSWAP-201ENST00000261674 KBTBD13C9JR72 458 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 MCF2LO15068 1137 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 KRT36O76013 467 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 RNF8O76064 485 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 MYL2P10916 166 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 EFHC2Q5JST6 749 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 SH3PXD2AQ5TCZ1 1133 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 FASTKD5Q7L8L6 764 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 SAPCD2Q86UD0 394 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 TDRPQ86YL5 185 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 RDM1Q8NG50 284 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 FAF2Q96CS3 445 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 NLRP4Q96MN2 994 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 MIPEPQ99797 713 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 TMEM120AQ9BXJ8 343 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CADM1Q9BY67 442 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 DDX56Q9NY93 547 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 FAM237BA0A1B0GVD1 139 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 ASS1P00966 412 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CDH6P55285 790 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 MXRA7P84157 204 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CAPSQ13938 189 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 KCTD2Q14681 263 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 TSNAXIP1Q2TAA8 658 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 RAB6CQ53S08 254 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 SLC45A4Q5BKX6 768 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CCDC62Q6P9F0 684 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 TRIM50Q86XT4 487 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 UBA3Q8TBC4 463 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 STMN2Q93045 179 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 SERAC1Q96JX3 654 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 C12orf42Q96LP6 360 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 NIF3L1Q9GZT8 377 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 RAB6CQ9H0N0 254 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 RAB6BQ9NRW1 208 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 MAD1L1Q9Y6D9 718 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CNTNAP2Q9UHC6 1331 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 C2CD2LO14523 706 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CNMDO75829 334 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 KDELR1P24390 212 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 NAMPTP43490 491 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 KDSRQ06136 332 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 BMPR2Q13873 1038 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 TAF1CQ15572 869 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 KLHL38Q2WGJ6 581 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 SLC35B2Q8TB61 432 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 DNAJC9Q8WXX5 260 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 CYTH2Q99418 400 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 GPATCH2LQ9NWQ4 482 aa15.11■□□□□ 0.01
SFSWAP-201ENST00000261674 ENO1P06733 434 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 POLR2BP30876 1174 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 SH3D19Q5HYK7 790 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 INPP5DQ92835 1189 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 CPXM1Q96SM3 734 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 TRIM56Q9BRZ2 755 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 ACSS3Q9H6R3 686 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 PPARGC1AQ9UBK2 798 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 TRIM49D1C9J1S8 452 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 CAPN9O14815 690 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 CCDC22O60826 627 aa15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 ZNF200P98182 395 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 FAM102AQ5T9C2 384 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-201ENST00000261674 PCGF5Q86SE9 256 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms