RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 APPL2Q8NEU8 664 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 SLC4A5Q9BY07 1137 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 FAM204AQ9H8W3 233 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 NEU2Q9Y3R4 380 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 TIMM13Q9Y5L4 95 aaPredicted RBP24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 NFS1Q9Y697 457 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 TTC3P53804 2025 aa24.52■■□□□ 1.52
SYNGR3-201ENST00000248121 hCG_1818297A0A087WSY0 165 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 CYB561D2O14569 222 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 SKIP12755 728 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 PTPN7P35236 360 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 GNL1P36915 607 aaPredicted RBP24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 GRIK3Q13003 919 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 LRRC26Q2I0M4 334 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 SMTNL2Q2TAL5 461 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 WSCD1Q658N2 575 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 OR6B2Q6IFH4 312 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 DEFB128Q7Z7B8 93 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 ZNF280BQ86YH2 543 aa24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 DDX56Q9NY93 547 aaKnown RBP24.51■■□□□ 1.51
SYNGR3-201ENST00000248121 LRRD1A4D1F6 860 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 DCDC2CA8MYV0 355 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 ENPP3O14638 875 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 OPA1O60313 960 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 COPS2P61201 443 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 PDE4CQ08493 712 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 PPP1R7Q15435 360 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 KCNT1Q5JUK3 1230 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 VWCEQ96DN2 955 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 RUFY1Q96T51 708 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 ZWILCHQ9H900 591 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 C2CD4BA6NLJ0 364 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 DDHD2O94830 711 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 CCDC130P13994 396 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 ACAT1P24752 427 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 IVDP26440 423 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 BRCC3P46736 316 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 RAB6CQ53S08 254 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 SH3PXD2AQ5TCZ1 1133 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 OLFML1Q6UWY5 402 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 TMEM110Q86TL2 294 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 ATL2Q8NHH9 583 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 KHSRPQ92945 711 aaKnown RBP eCLIP24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 ART4Q93070 314 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 SENP8Q96LD8 212 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 RAB6CQ9H0N0 254 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 HOMER3Q9NSC5 361 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 HCSTQ9UBK5 93 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 TBX21Q9UL17 535 aa24.5■■□□□ 1.51
SYNGR3-201ENST00000248121 HUS1O60921 280 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 ATP2C2O75185 946 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 SETSIPP0DME0 302 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 MIPP30301 263 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 ZNF143P52747 638 aaPredicted RBP24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 PTK6Q13882 451 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 TAF5Q15542 800 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 TIGD5Q53EQ6 642 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 TFDP3Q5H9I0 405 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 KIAA0319Q5VV43 1072 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 FTHL17Q9BXU8 183 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 EPB41L4BQ9H329 900 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 INPPL1O15357 1258 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 GRAP2O75791 330 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 EOMESO95936 686 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 TUSC3Q13454 348 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 OR2W6PQ8NHA6 318 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 RXFP2Q8WXD0 754 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 TOX2Q96NM4 488 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 UBN1Q9NPG3 1134 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 ATP8A1Q9Y2Q0 1164 aa24.49■■□□□ 1.51
SYNGR3-201ENST00000248121 FNDC1Q4ZHG4 1894 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 GOLGA8KD6RF30 607 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 PAPSS1O43252 624 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 TJP3O95049 919 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 GBP1P32455 592 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 CETN2P41208 172 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 CTCFP49711 727 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 ACAP1Q15027 740 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 TOP6BLQ8N6T0 577 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 UBLCP1Q8WVY7 318 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 EXOC4Q96A65 974 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 PEBP4Q96S96 227 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 SNX25Q9H3E2 840 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 HESX1Q9UBX0 185 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 PCSK1NQ9UHG2 260 aa24.48■■□□□ 1.51
SYNGR3-201ENST00000248121 B3GAT3O94766 335 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 KRT7P08729 469 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 GPD1P21695 349 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 ITGB8P26012 769 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 TRIP13Q15645 432 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 HADHQ16836 314 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 C1orf53Q5VUE5 145 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 GLB1LQ6UWU2 654 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 LRIG3Q6UXM1 1119 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 SYDE1Q6ZW31 735 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 CYP4V2Q6ZWL3 525 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 SCUBE3Q8IX30 993 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 GRK7Q8WTQ7 553 aa24.47■■□□□ 1.51
SYNGR3-201ENST00000248121 STK32AQ8WU08 396 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms