RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PSMC4P43686 418 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 ARL4CP56559 192 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 SNX16P57768 344 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 PDK2Q15119 407 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 NOMO1Q15155 1222 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 EFHC2Q5JST6 749 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 PLEKHH3Q7Z736 793 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 ZDHHC17Q8IUH5 632 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 TEKT4Q8WW24 435 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.36e-7■■■□□ 17.2
UBE3D-201ENST00000237186 RNF157Q96PX1 679 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 TBCBQ99426 244 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 NRCAMQ92823 1304 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 A6NJR5 290 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 PRPSAP2O60256 369 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 NPTXRO95502 500 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 SCTRP47872 440 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 CDH6P55285 790 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 GPX6P59796 221 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 TMED2Q15363 201 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 CCDC14Q49A88 953 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 PPP1R26Q5T8A7 1209 aaPredicted RBP16.91■□□□□ 0.3
UBE3D-201ENST00000237186 SH3PXD2AQ5TCZ1 1133 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 ANKRD22Q5VYY1 191 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 PMF1Q6P1K2 205 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 OLFML1Q6UWY5 402 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 TTC30AQ86WT1 665 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MAP7D3Q8IWC1 876 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 SPATA18Q8TC71 538 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MGARPQ8TDB4 240 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MRPL45Q9BRJ2 306 aaKnown RBP16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MAK16Q9BXY0 300 aaKnown RBP16.91■□□□□ 0.3
UBE3D-201ENST00000237186 SNTG2Q9NY99 539 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MGAMO43451 1857 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 CLUHO75153 1309 aa16.91■□□□□ 0.3
UBE3D-201ENST00000237186 MBLAC1A4D2B0 266 aaPredicted RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ZNF487B1APH4 448 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 GSTA1P08263 222 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 STX2P32856 288 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 PHBP35232 272 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 SLC6A3Q01959 620 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 DPH6Q7L8W6 267 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ANKRD42Q8N9B4 389 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ATP11CQ8NB49 1132 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 PIWIL1Q96J94 861 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 DHRS4Q9BTZ2 278 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 CALN1Q9BXU9 219 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 VPS37BQ9H9H4 285 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 RABGEF1Q9UJ41 708 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 SMG5Q9UPR3 1016 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 SNX9Q9Y5X1 595 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 H0YHG0 523 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 CAPN15O75808 1086 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 RASSF9O75901 435 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ASMTLO95671 621 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 F2P00734 622 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 IL4RP24394 825 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 AXLP30530 894 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 FNBP1LQ5T0N5 605 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ARCQ7LC44 396 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 CATSPER4Q7RTX7 472 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 C2orf69Q8N8R5 385 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 FAM71DQ8N9W8 422 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 PYROXD1Q8WU10 500 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 PARK7Q99497 189 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 CXCL16Q9H2A7 254 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 C10orf88Q9H8K7 445 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 SSU72Q9NP77 194 aaKnown RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 USP15Q9Y4E8 981 aaPredicted RBP16.9■□□□□ 0.3
UBE3D-201ENST00000237186 NME7Q9Y5B8 376 aa16.9■□□□□ 0.3
UBE3D-201ENST00000237186 ADCY6O43306 1168 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 SCNN1AP37088 669 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 WDR4P57081 412 aaKnown RBP16.89■□□□□ 0.29
UBE3D-201ENST00000237186 IL9RQ01113 521 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 C15orf59Q2T9L4 293 aaPredicted RBP16.89■□□□□ 0.29
UBE3D-201ENST00000237186 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 FBXW10Q5XX13 1052 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 RGS9BPQ6ZS82 235 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms