RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SYF2O95926 243 aaKnown RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 TGM2P21980 687 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 OCA2Q04671 838 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 MTFR1Q15390 333 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 CHI3L2Q15782 390 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 RRM2BQ7LG56 351 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 FAM131BQ86XD5 332 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 FAM172AQ8WUF8 416 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 TATDN2Q93075 761 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 NAT9Q9BTE0 207 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 GPR63Q9BZJ6 419 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 CYP3A43Q9HB55 503 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 RGS2P41220 211 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 BCAT1P54687 386 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SLC12A3P55017 1021 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 LRRC36Q1X8D7 754 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 KIF2BQ8N4N8 673 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 GLIS3Q8NEA6 775 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 MKL1Q969V6 931 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 YY1AP1Q9H869 796 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 WNT10BO00744 389 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CYB561D2O14569 222 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 LSM8O95777 96 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 MAPTP10636 758 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 ALDH1A3P47895 512 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 INPP5AQ14642 412 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CNGA3Q16281 694 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CATSPER1Q8NEC5 780 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 ACTL9Q8TC94 416 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 EPS8L3Q8TE67 593 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 HDAC7Q8WUI4 952 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 WHRNQ9P202 907 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SH3BP1Q9Y3L3 701 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 ARHGAP10A1A4S6 786 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CFAP99D6REC4 459 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 GPR182O15218 404 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 GLI1P08151 1106 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CHRM3P20309 590 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CYP3A7P24462 503 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 DSG3P32926 999 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 TMED1Q13445 227 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 ARHGEF7Q14155 803 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CCNG2Q16589 344 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 DDX53Q86TM3 631 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 MIB1Q86YT6 1006 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CCNJLQ8IV13 435 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 LRRC34Q8IZ02 419 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 FBXO36Q8NEA4 188 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 FOPNLQ96NB1 174 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 COG4Q9H9E3 785 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 KIF17Q9P2E2 1029 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 MYH2Q9UKX2 1941 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SUPT3HO75486 399 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 CXCL8P10145 99 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 IRF1P10914 325 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 INSRRP14616 1297 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 LAMTOR4Q0VGL1 99 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 KCNMA1Q12791 1236 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 KDM7AQ6ZMT4 941 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 RXFP2Q8WXD0 754 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 NAF1Q96HR8 494 aaKnown RBP11.94□□□□□ -0.5
NOD1-201ENST00000222823 TMEM121Q9BTD3 319 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
NOD1-201ENST00000222823 COL1A1P02452 1464 aaPredicted RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 VWA5AO00534 786 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 STX7O15400 261 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 CORO7P57737 925 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 FAM83EQ2M2I3 478 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 ARHGAP18Q8N392 663 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 TMEM169Q96HH4 297 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 CDC42EP4Q9H3Q1 356 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 TRIM45Q9H8W5 580 aaPredicted RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 CD274Q9NZQ7 290 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 MYH7P12883 1935 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms