RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CXCL11O14625 94 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 VNN1O95497 513 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 GSTA1P08263 222 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 PAEPP09466 180 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 PYGBP11216 843 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ADRA1DP25100 572 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ADCYAP1R1P41586 468 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ALLCQ8N6M5 410 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 TLCD1Q96CP7 247 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 SLCO1B3Q9NPD5 702 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 HES2Q9Y543 173 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ENO1P06733 434 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 AKAP5P24588 427 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ATICP31939 592 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 RPA3P35244 121 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 RPL22P35268 128 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 GCKP35557 465 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 EPHB1P54762 984 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 DEUP1Q05D60 604 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 DTX3LQ8TDB6 740 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 HEY2Q9UBP5 337 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 PMM2O15305 246 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 GHRP10912 638 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ALDH18A1P54886 795 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 C12orf29Q8N999 325 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 RNF139Q8WU17 664 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 RXFP1Q9HBX9 757 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CD4P01730 458 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 APOC2P02655 101 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 LGALS2P05162 132 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 SRGAP2BP0DMP2 458 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 GNAT1P11488 350 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP2B6P20813 491 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ARPP19P56211 112 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 TPI1P60174 286 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 FASTKD3Q14CZ7 662 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 FRMD8P1Q9BZ68 369 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 OSBPL7Q9BZF2 842 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 H0YGN5 161 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 MOCS2O96007 188 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 HMGCRP04035 888 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 PDHA1P08559 390 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 STX3Q13277 289 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 DENND5BQ6ZUT9 1274 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 MTDHQ86UE4 582 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 SLC7A14Q8TBB6 771 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CEP41Q9BYV8 373 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 UBQLN1Q9UMX0 589 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 TNFSF13BQ9Y275 285 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 NFS1Q9Y697 457 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CRCPO75575 148 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ADORA2AP29274 412 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 THOC5Q13769 683 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 PDK2Q15119 407 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 AFAP1L2Q8N4X5 818 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 FAM193BQ96PV7 902 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 AP4E1Q9UPM8 1137 aa12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-201ENST00000217315 M0QYT0 321 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 C6orf222P0C671 652 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 RBL1P28749 1068 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 FSTL1Q12841 308 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 MCUQ8NE86 351 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 E2F7Q96AV8 911 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms