RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RRP15Q9Y3B9 282 aaKnown RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 PSMD3O43242 534 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 GABPB1Q06547 395 aaPredicted RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 CAPRIN1Q14444 709 aaKnown RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
SIX4-201ENST00000216513 FAM131BQ86XD5 332 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 ADSSL1Q8N142 457 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 ADAM32Q8TC27 787 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 FAM105AQ9NUU6 356 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 PDZK1P1A8MUH7 402 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 A8MX80 341 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 EML1O00423 815 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 MZF1P28698 734 aaPredicted RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 SLC2A14Q8TDB8 520 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 CISHQ9NSE2 258 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 PADI3Q9ULW8 664 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 ONECUT3O60422 494 aaPredicted RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 PARNO95453 639 aaKnown RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 SCNN1BP51168 640 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 ARSEP51690 589 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 MAB21L3Q8N8X9 362 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 LZICQ8WZA0 190 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 GABRR2P28476 465 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 PLPPR4Q7Z2D5 763 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 RCOR2Q8IZ40 523 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 USP13Q92995 863 aaPredicted RBP14.3□□□□□ -0.12
SIX4-201ENST00000216513 KCNF1Q9H3M0 494 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 IFT172Q9UG01 1749 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 SPATA31C2B4DYI2 1134 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 KRT37O76014 449 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 GFAPP14136 432 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 NOL9Q5SY16 702 aaKnown RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 GBP5Q96PP8 586 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 TRIM51Q9BSJ1 452 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 ABCG4Q9H172 646 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 GPATCH2LQ9NWQ4 482 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 USP17L7P0C7H9 530 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 NR1D1P20393 614 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 PDIA2Q13087 525 aaKnown RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 SPDYE7PQ495Y7 208 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 ELMO2Q96JJ3 720 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 C11orf84Q9BUA3 381 aaPredicted RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 ARHGEF38Q9NXL2 777 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 NDOR1Q9UHB4 597 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 OR1E1P30953 314 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 CDH8P55286 799 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 MAGOHP61326 146 aaKnown RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 HSDL1Q3SXM5 330 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 FBXL19Q6PCT2 694 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 RFFLQ8WZ73 363 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 MYOCQ99972 504 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 ATP13A1Q9HD20 1204 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 TRIM59Q8IWR1 403 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
SIX4-201ENST00000216513 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 KIAA1257Q9ULG3 409 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 FAM95CA0A1B0GW59 222 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 F9P00740 461 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 GPR158Q5T848 1215 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 PTPRN2Q92932 1015 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 TTPALQ9BTX7 342 aa14.29□□□□□ -0.12
SIX4-201ENST00000216513 CCR1P32246 355 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 RETSATQ6NUM9 610 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SLC24A5Q71RS6 500 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 MKNK1Q9BUB5 465 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 CPSF2Q9P2I0 782 aaKnown RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SLC1A1P43005 524 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 COPS2P61201 443 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 CDR2Q01850 454 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 TMCO5AQ8N6Q1 288 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 CCDC3Q9BQI4 270 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SUN2Q9UH99 717 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 ATP5C1P36542 298 aaKnown RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 RAB6BQ9NRW1 208 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 C2orf81A6NN90 581 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 TRDMT1O14717 391 aaKnown RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 ATP9AO75110 1047 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SLC35G2Q8TBE7 412 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 SDCCAG3Q96C92 435 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 BARX2Q9UMQ3 279 aaPredicted RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 IFNA8P32881 189 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 PTPN11Q06124 597 aaPredicted RBP14.28□□□□□ -0.12
SIX4-201ENST00000216513 SNCBQ16143 134 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 HECTD3Q5T447 861 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms