RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PLXND1Q9Y4D7 1925 aa16.91■□□□□ 0.3
ERCC1-201ENST00000013807 A0A0A0MRY4 1105 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 LEFTY2O00292 366 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
ERCC1-201ENST00000013807 EXOC3O60645 756 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 RPP40O75818 363 aaKnown RBP16.9■□□□□ 0.3
ERCC1-201ENST00000013807 NFATC1O95644 943 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 STK4Q13043 487 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
ERCC1-201ENST00000013807 NAIF1Q69YI7 327 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-201ENST00000013807 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 CEP57L1Q8IYX8 460 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 KCTD10Q9H3F6 313 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 DPEP3Q9H4B8 488 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 USP25Q9UHP3 1055 aa16.9■□□□□ 0.3
ERCC1-201ENST00000013807 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.9■□□□□ 0.3
ERCC1-201ENST00000013807 FAM92AA1XBS5 289 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 A8MXQ7 604 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PDXKO00764 312 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 SLC9A3R1O14745 358 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 IKBKBO14920 756 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 ZNF806P0C7X5 589 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 CMA1P23946 247 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 OPRD1P41143 372 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PI4KAP42356 2102 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 LIMK1P53667 647 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 DNM1Q05193 864 aaKnown RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 TAF10Q12962 218 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PKP1Q13835 747 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PLA2G2CQ5R387 149 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PAQR9Q6ZVX9 377 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 CEP68Q76N32 757 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 ACDQ96AP0 544 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 ZNF518BQ9C0D4 1074 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 COMMD8Q9NX08 183 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
ERCC1-201ENST00000013807 SERTAD1Q9UHV2 236 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 HPSEQ9Y251 543 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 PCDHGA5Q9Y5G8 931 aa16.89■□□□□ 0.29
ERCC1-201ENST00000013807 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 LRRIQ3A6PVS8 624 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-201ENST00000013807 K7EQS6 105 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 TNFRSF10BO14763 440 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 EPN2O95208 641 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 VNN1O95497 513 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
ERCC1-201ENST00000013807 YWHAQP27348 245 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
ERCC1-201ENST00000013807 CASP4P49662 377 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 MCCD1P59942 119 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-201ENST00000013807 ZACNQ401N2 412 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 CRYBG2Q8N1P7 616 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 PDZD8Q8NEN9 1154 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 RPLP0P6Q8NHW5 317 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 TMC2Q8TDI7 906 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 TAF4BQ92750 862 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 TNIP3Q96KP6 325 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
ERCC1-201ENST00000013807 GON4LQ3T8J9 2241 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 AXIN1O15169 862 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 MAPK13O15264 365 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 PHACTR2O75167 634 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 ZDHHC11BP0C7U3 371 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-201ENST00000013807 PXNP49023 591 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-201ENST00000013807 TUBP50607 506 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 CDH8P55286 799 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 NCOA4Q13772 614 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 DMC1Q14565 340 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 NFIL3Q16649 462 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 KMT5BQ4FZB7 885 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 KBTBD6Q86V97 674 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 DDX42Q86XP3 938 aaKnown RBP eCLIP16.87■□□□□ 0.29
ERCC1-201ENST00000013807 GRAMD1CQ8IYS0 662 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 USP33Q8TEY7 942 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 OTUB2Q96DC9 234 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 CSNK1G1Q9HCP0 422 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 TRAF3IP3Q9Y228 551 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 CPQQ9Y646 472 aa16.87■□□□□ 0.29
ERCC1-201ENST00000013807 KMT2BQ9UMN6 2715 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-201ENST00000013807 CEP192Q8TEP8 1941 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-201ENST00000013807 E2F8A0AVK6 867 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 DCDC2BA2VCK2 349 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 CLDN5O00501 218 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 TM4SF5O14894 197 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 APBB3O95704 486 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 CYP17A1P05093 508 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 HSP90AA1P07900 732 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms