RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 FntaQ61239 377 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Sdad1Q80UZ2 687 aaKnown RBP23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Erlin2Q8BFZ9 340 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 EmsyQ8BMB0 1264 aaKnown RBP23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Nrip1Q8CBD1 1161 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Rbm12Q8R4X3 992 aaKnown RBP23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Sh2b1Q91ZM2 756 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Syf2Q9D198 242 aaKnown RBP23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 LrmdaQ9D9B4 229 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gde1Q9JL56 331 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Sf3b1Q99NB9 1304 aaKnown RBP23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zscan4dA7KBS4 506 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gm13212B1ASQ7 799 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Olfr1354E9Q5G9 310 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Nfatc2ipO09130 412 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Yme1l1O88967 715 aaKnown RBP23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 P01648 108 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Mxi1P50540 228 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 GssP51855 474 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zscan4fQ3URS2 506 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ccdc114Q3UX62 658 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Mtus1Q5HZI1 1210 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zscan4cQ80VJ6 506 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Camta2Q80Y50 1208 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Kbtbd3Q8BHI4 607 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Lig4Q8BTF7 911 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fermt3Q8K1B8 665 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 P3h4Q8K2B0 443 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Timd2Q8R183 305 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ccdc71Q8VEG0 433 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Caskin2Q8VHK1 1201 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 CactinQ9CS00 772 aaKnown RBP23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tspan3Q9QY33 253 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Dock1Q8BUR4 1865 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 TriobpQ99KW3 2014 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 0610012G03RikA0A0J9YTR2 95 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zfp174B9EJW5 407 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Farp1F8VPU2 1048 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Vti1aO89116 217 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Hoxd8P23463 289 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ptpn22P29352 802 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Smarcad1Q04692 1021 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ndufaf2Q59J78 168 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gm4952Q5FW57 296 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tmem45aQ60774 273 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 AmphQ7TQF7 686 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Olfr670Q7TRP3 312 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fbxl21Q8BFZ4 434 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fam163bQ8BUM6 167 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Rpa3Q9CQ71 121 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cep19Q9CQA8 163 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cul2Q9D4H8 745 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gtf2ird1Q9JI57 1104 aaKnown RBP23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cyp39a1Q9JKJ9 470 aa23.78■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Xbp1O35426 267 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 P01878 344 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ccl5P30882 91 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Psmc1P62192 440 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tspyl3Q3UYP3 334 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Oca2Q62052 833 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tcp10aQ80W76 438 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zdhhc19Q810M5 347 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tmem209Q8BRG8 561 aaKnown RBP23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Anapc5Q8BTZ4 740 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fam114a1Q9D281 569 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Irs2P81122 1321 aa23.77■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Usp4P35123 962 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Uchl4P58321 233 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Cops2P61202 443 aaKnown RBP23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 IhhP97812 411 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Nlrc4Q3UP24 1024 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 HarsQ61035 509 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Tfap2bQ61313 459 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 March4Q80TE3 409 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fnbp1Q80TY0 616 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Creb3l2Q8BH52 521 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rufy1Q8BIJ7 712 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mageb18Q8BQR7 327 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Slc9a4Q8BUE1 797 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Brat1Q8C3R1 822 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rsad2Q8CBB9 362 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 FgbQ8K0E8 481 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Unc5bQ8K1S3 945 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mcoln2Q8K595 566 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Q9CQC3 228 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fam212aQ9CX62 282 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mms19Q9D071 1031 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Clec1bQ9JL99 229 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Drg2Q9QXB9 364 aaKnown RBP23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Sept3Q9Z1S5 350 aa23.76■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rgs22G3UYX5 1258 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ctnnd1P30999 938 aaKnown RBP23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Hsd17b1P51656 344 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Zrsr2Q62377 462 aaKnown RBP23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gpsm1Q6IR34 673 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Wdr44Q6NVE8 915 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gpr156Q6PCP7 798 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ostm1Q8BGT0 338 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Tmem161aQ8VCA6 480 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rpl17Q9CPR4 184 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms