RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Hace1Q3U0D9 909 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 PighQ5M9N4 188 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Mbtd1Q6P5G3 631 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Elac2Q80Y81 831 aaKnown RBP19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Me2Q99KE1 589 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Dpp3Q99KK7 738 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Mcrs1Q99L90 462 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rilpl2Q99LE1 197 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Nsmce3Q9CPR8 279 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Gm44503E9PYU5 387 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 AlpiF8VPQ6 554 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Gm17535J3KMR8 224 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 CflarO35732 481 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Dnase1l3O55070 310 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Scp2P32020 547 aaKnown RBP19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rab6bP61294 208 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rcsd1Q3UZA1 412 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Grik1Q60934 836 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Eif2dQ61211 570 aaKnown RBP19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Tas2r102Q7M717 329 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Moxd2Q7TT41 619 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Spata21Q8BHW6 681 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rnf112Q96DY5 654 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Il21rQ9JHX3 529 aa19.17■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Abcb5B5X0E4 1255 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ccdc13D3YV10 709 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Farp1F8VPU2 1048 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 ChkaO54804 453 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 HpdP49429 393 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 YwhazP63101 245 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Smad1P70340 465 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Cntn3Q07409 1028 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Calb2Q08331 271 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Fam83hQ148V8 1209 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rsl1d1Q8BVY0 452 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rhpn2Q8BWR8 686 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Phactr3Q8BYK5 558 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Polr2bQ8CFI7 1174 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Pde6cQ91ZQ1 861 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Mxra7Q9CZH7 178 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Sun1Q9D666 913 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Vmn2r25W4VSP2 855 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Arid2E9Q7E2 1828 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ism2D3Z6A3 493 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Edil3O35474 480 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Cetn1P41209 172 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 TdgP56581 421 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rps12P63323 132 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ccndbp1Q3TVC7 356 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ints6lQ8BND4 861 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Kat14Q8CID0 779 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Csde1Q91W50 798 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Akr1c14Q91WT7 323 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Trps1Q925H1 1281 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ptdss1Q99LH2 473 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ssu72Q9CY97 194 aaKnown RBP19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Scyl3Q9DBQ7 735 aa19.16■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Gm29133A0A1B0GT72 266 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Mroh5E9PUJ8 762 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 DldO08749 509 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Timm44O35857 452 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Irf3P70671 419 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Glt6d1Q2NKH9 311 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Alkbh5Q3TSG4 395 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Trappc3lQ4KL14 181 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Pabpn1lQ5XFR0 273 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 ItpkcQ7TS72 678 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Trpa1Q8BLA8 1125 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Acvr1cQ8K348 493 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Chrac1Q9JKP8 129 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Mpp5Q9JLB2 675 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ripk3Q9QZL0 486 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 1700031M16RikA0A087WSH0 82 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Chrna1P04756 457 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Icam1P13597 537 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Glb1P23780 647 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Foxn1Q61575 648 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Hsph1Q61699 858 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Fam214aQ69ZK7 1075 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Gucy2gQ6TL19 1100 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Cand1Q6ZQ38 1230 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Rpf1Q7TND5 349 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ccnt2Q7TQK0 723 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Ddx42Q810A7 929 aaKnown RBP19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Q8BHN7 327 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Hdac7Q8C2B3 938 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Tk2Q9R088 270 aa19.15■□□□□ 0.66
Ccdc3-201ENSMUST00000027988 Itga9B8JK39 1036 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Arhgap45Q3TBD2 1116 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Hexim2Q3TVI4 313 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Lrrc14bQ3UJB3 510 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Nlrc4Q3UP24 1024 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Tmcc1Q69ZZ6 649 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Ddx55Q6ZPL9 600 aaKnown RBP19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Lonp1Q8CGK3 949 aaKnown RBP19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Snrnp25Q8VIK1 123 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Nt5c3aQ9D020 331 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Plod3Q9R0E1 741 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 MycsQ9Z304 431 aa19.14■□□□□ 0.65
Ccdc3-201ENSMUST00000027988 Gm5538W4VSP6 401 aa19.14■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms