RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W FIG2P25653 1609 aa2.41□□□□□ -2.02
VPS27YNR006W FLO1P32768 1537 aa2.4□□□□□ -2.02
VPS27YNR006W FLO9P39712 1322 aa2.4□□□□□ -2.03
VPS27YNR006W ECM31P38122 312 aa2.39□□□□□ -2.03
VPS27YNR006W PAU12P53343 120 aa2.39□□□□□ -2.03
VPS27YNR006W TAR1Q8TGM6 124 aa2.39□□□□□ -2.03
VPS27YNR006W MET31Q03081 177 aa2.39□□□□□ -2.03
VPS27YNR006W YLR365WQ7LIF2 110 aa2.39□□□□□ -2.03
VPS27YNR006W RIF1P29539 1916 aa2.38□□□□□ -2.03
VPS27YNR006W FAB1P34756 2278 aa2.38□□□□□ -2.03
VPS27YNR006W RTC6O14464 93 aa2.38□□□□□ -2.03
VPS27YNR006W AIM18P38884 321 aa2.38□□□□□ -2.03
VPS27YNR006W YEL008WP40001 126 aa2.38□□□□□ -2.03
VPS27YNR006W YLR162WQ06235 118 aa2.37□□□□□ -2.03
VPS27YNR006W MRPL15P36523 253 aa2.36□□□□□ -2.03
VPS27YNR006W YER187WP40102 141 aa2.36□□□□□ -2.03
VPS27YNR006W PEP8P40335 379 aa2.36□□□□□ -2.03
VPS27YNR006W YMR090WQ04304 227 aaKnown RBP2.36□□□□□ -2.03
VPS27YNR006W YHR086W-AQ3E746 53 aa2.36□□□□□ -2.03
VPS27YNR006W MHF1Q3E835 90 aa2.36□□□□□ -2.03
VPS27YNR006W MIC10Q96VH5 97 aa2.36□□□□□ -2.03
VPS27YNR006W PAU2P32612 120 aa2.35□□□□□ -2.03
VPS27YNR006W IGO1P53897 168 aa2.35□□□□□ -2.03
VPS27YNR006W RGM1Q00453 211 aa2.35□□□□□ -2.03
VPS27YNR006W YIL014C-AQ02598 104 aa2.35□□□□□ -2.03
VPS27YNR006W YPL261CQ08976 102 aa2.35□□□□□ -2.03
VPS27YNR006W NRG2P38082 220 aa2.35□□□□□ -2.03
VPS27YNR006W YBR219CP38317 127 aa2.35□□□□□ -2.03
VPS27YNR006W YCR075W-AQ3E830 75 aa2.35□□□□□ -2.03
VPS27YNR006W UBC4P15731 148 aa2.34□□□□□ -2.03
VPS27YNR006W PRE1P22141 198 aaKnown RBP2.33□□□□□ -2.04
VPS27YNR006W YLR194CQ05777 254 aa2.33□□□□□ -2.04
VPS27YNR006W YKL068W-AQ3E826 78 aa2.33□□□□□ -2.04
VPS27YNR006W MRPL11P36521 249 aaPredicted RBP2.33□□□□□ -2.04
VPS27YNR006W PAU24P38155 120 aa2.33□□□□□ -2.04
VPS27YNR006W GTT1P40582 234 aa2.33□□□□□ -2.04
VPS27YNR006W DAD1Q12248 94 aa2.33□□□□□ -2.04
VPS27YNR006W KSH1Q8TGJ3 72 aa2.33□□□□□ -2.04
VPS27YNR006W OST5Q92316 86 aa2.33□□□□□ -2.04
VPS27YNR006W RPL22AP05749 121 aaKnown RBP2.32□□□□□ -2.04
VPS27YNR006W YGL010WP25338 174 aa2.32□□□□□ -2.04
VPS27YNR006W SCP1Q08873 200 aa2.32□□□□□ -2.04
VPS27YNR006W ATG8P38182 117 aaRIP-Chip data2.31□□□□□ -2.04not detected
VPS27YNR006W FIT1Q04433 528 aa2.31□□□□□ -2.04
VPS27YNR006W YLR296WQ05898 108 aa2.31□□□□□ -2.04
VPS27YNR006W YGL194C-AQ2V2P6 80 aa2.31□□□□□ -2.04
VPS27YNR006W HUR1P45820 110 aa2.31□□□□□ -2.04
VPS27YNR006W PCC1Q3E833 88 aa2.31□□□□□ -2.04
VPS27YNR006W YOS1Q3E834 85 aa2.31□□□□□ -2.04
VPS27YNR006W RPL36BO14455 100 aaKnown RBP2.3□□□□□ -2.04
VPS27YNR006W RPL36AP05745 100 aaPredicted RBP2.3□□□□□ -2.04
VPS27YNR006W QCR8P08525 94 aa2.3□□□□□ -2.04
VPS27YNR006W YGL014C-AP0C5N1 53 aa2.3□□□□□ -2.04
VPS27YNR006W COA3Q3E7B2 85 aa2.3□□□□□ -2.04
VPS27YNR006W PAU19P0CE85 124 aa2.29□□□□□ -2.04
VPS27YNR006W YHR213WP0CI67 198 aa2.29□□□□□ -2.04
VPS27YNR006W YCL042WP25572 119 aa2.29□□□□□ -2.04
VPS27YNR006W PAU3P25610 124 aa2.29□□□□□ -2.04
VPS27YNR006W YBR027CP38220 110 aa2.29□□□□□ -2.04
VPS27YNR006W ECM29P38737 1868 aa2.29□□□□□ -2.04
VPS27YNR006W YJL197C-AP0C5P0 93 aa2.28□□□□□ -2.04
VPS27YNR006W COX23P38824 151 aa2.28□□□□□ -2.04
VPS27YNR006W YIR020CP40575 100 aa2.28□□□□□ -2.04
VPS27YNR006W SNN1P48232 102 aa2.28□□□□□ -2.04
VPS27YNR006W YNL146C-AQ3E7Z1 64 aa2.28□□□□□ -2.04
VPS27YNR006W COA6Q3E846 104 aa2.28□□□□□ -2.04
VPS27YNR006W CDC39P25655 2108 aaKnown RBP2.28□□□□□ -2.04
VPS27YNR006W AIM4P38305 123 aaPredicted RBP2.28□□□□□ -2.04
VPS27YNR006W YBR242WP38331 238 aa2.28□□□□□ -2.04
VPS27YNR006W RPL22BP56628 122 aaKnown RBP2.28□□□□□ -2.04
VPS27YNR006W HPA2Q06592 156 aa2.28□□□□□ -2.04
VPS27YNR006W LAA1P39526 2014 aa2.28□□□□□ -2.04
VPS27YNR006W TOM1Q03280 3268 aa2.27□□□□□ -2.05
VPS27YNR006W RPL13BP40212 199 aaKnown RBP2.27□□□□□ -2.05
VPS27YNR006W SED1Q01589 338 aa2.27□□□□□ -2.05
VPS27YNR006W SEN15Q04675 128 aa2.27□□□□□ -2.05
VPS27YNR006W MOT1P32333 1867 aa2.27□□□□□ -2.05
VPS27YNR006W RPL33AP05744 107 aaKnown RBP2.26□□□□□ -2.05
VPS27YNR006W SRX1P36077 127 aa2.26□□□□□ -2.05
VPS27YNR006W LST8P41318 303 aa2.26□□□□□ -2.05
VPS27YNR006W VMA21P41806 77 aa2.26□□□□□ -2.05
VPS27YNR006W SWC7Q06707 132 aa2.26□□□□□ -2.05
VPS27YNR006W SNU13P39990 126 aaKnown RBP2.26□□□□□ -2.05
VPS27YNR006W YFL065CP43539 102 aa2.26□□□□□ -2.05
VPS27YNR006W RSM19P53733 91 aaPredicted RBP2.26□□□□□ -2.05
VPS27YNR006W VAM10Q08474 114 aa2.26□□□□□ -2.05
VPS27YNR006W FIT3Q08907 204 aa2.26□□□□□ -2.05
VPS27YNR006W PRM3Q08931 133 aa2.26□□□□□ -2.05
VPS27YNR006W EMC5P40540 141 aa2.25□□□□□ -2.05
VPS27YNR006W YMR122CQ03879 124 aa2.25□□□□□ -2.05
VPS27YNR006W YMR321CQ04898 105 aa2.25□□□□□ -2.05
VPS27YNR006W YDR029WQ12111 104 aa2.25□□□□□ -2.05
VPS27YNR006W PAU16P35994 123 aa2.24□□□□□ -2.05
VPS27YNR006W SMX2P40204 77 aaKnown RBP2.24□□□□□ -2.05
VPS27YNR006W PAU15P40585 124 aa2.24□□□□□ -2.05
VPS27YNR006W RRT15Q3E811 62 aa2.24□□□□□ -2.05
VPS27YNR006W CYR1P08678 2026 aaKnown RBP2.23□□□□□ -2.05
VPS27YNR006W NHP10Q03435 203 aa2.23□□□□□ -2.05
VPS27YNR006W MIX14Q04341 121 aa2.23□□□□□ -2.05
VPS27YNR006W HMRA2P0CY13 119 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms